Protein–RNA interactions for Protein: P09079

Hoxb5, Homeobox protein Hox-B5, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb5P09079 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb5P09079 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb5P09079 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb5P09079 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb5P09079 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb5P09079 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxb5P09079 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb5P09079 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb5P09079 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb5P09079 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb5P09079 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Hoxb5P09079 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb5P09079 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb5P09079 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.62■□□□□ 0.73
Hoxb5P09079 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb5P09079 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb5P09079 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb5P09079 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb5P09079 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb5P09079 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb5P09079 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb5P09079 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb5P09079 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb5P09079 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hoxb5P09079 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb5P09079 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb5P09079 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Hoxb5P09079 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Hoxb5P09079 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.58■□□□□ 0.72
Hoxb5P09079 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxb5P09079 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxb5P09079 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxb5P09079 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxb5P09079 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxb5P09079 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.57■□□□□ 0.72
Hoxb5P09079 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Hoxb5P09079 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
Hoxb5P09079 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb5P09079 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb5P09079 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hoxb5P09079 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.56■□□□□ 0.72
Hoxb5P09079 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxb5P09079 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxb5P09079 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxb5P09079 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Hoxb5P09079 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Hoxb5P09079 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hoxb5P09079 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hoxb5P09079 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxb5P09079 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxb5P09079 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.54■□□□□ 0.72
Hoxb5P09079 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxb5P09079 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxb5P09079 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hoxb5P09079 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxb5P09079 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxb5P09079 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxb5P09079 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.53■□□□□ 0.72
Hoxb5P09079 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Hoxb5P09079 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hoxb5P09079 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.53■□□□□ 0.72
Hoxb5P09079 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxb5P09079 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxb5P09079 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxb5P09079 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hoxb5P09079 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Hoxb5P09079 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Hoxb5P09079 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb5P09079 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Hoxb5P09079 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxb5P09079 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Hoxb5P09079 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxb5P09079 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Hoxb5P09079 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxb5P09079 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Hoxb5P09079 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxb5P09079 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Hoxb5P09079 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Hoxb5P09079 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Hoxb5P09079 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Hoxb5P09079 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Hoxb5P09079 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Hoxb5P09079 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Hoxb5P09079 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Hoxb5P09079 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.47■□□□□ 0.71
Hoxb5P09079 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb5P09079 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb5P09079 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb5P09079 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb5P09079 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb5P09079 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb5P09079 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
Hoxb5P09079 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb5P09079 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Hoxb5P09079 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.45■□□□□ 0.7
Hoxb5P09079 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Hoxb5P09079 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Hoxb5P09079 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb5P09079 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Hoxb5P09079 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms