Protein–RNA interactions for Protein: P01896

H-2 class I histocompatibility antigen, alpha chain (Fragment), mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01896 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01896 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P01896 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P01896 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
P01896 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
P01896 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
P01896 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
P01896 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01896 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01896 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P01896 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
P01896 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01896 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01896 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01896 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01896 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01896 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01896 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P01896 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01896 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01896 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
P01896 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01896 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
P01896 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P01896 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
P01896 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
P01896 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
P01896 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
P01896 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P01896 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P01896 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
P01896 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01896 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P01896 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.61■□□□□ 0.25
P01896 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC16.61■□□□□ 0.25
P01896 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
P01896 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC16.61■□□□□ 0.25
P01896 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
P01896 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC16.6■□□□□ 0.25
P01896 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
P01896 Gm16148-201ENSMUST00000119653 893 ntBASIC16.59■□□□□ 0.25
P01896 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
P01896 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.59■□□□□ 0.25
P01896 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.59■□□□□ 0.25
P01896 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01896 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
P01896 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
P01896 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
P01896 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC16.58■□□□□ 0.24
P01896 Amer2-203ENSMUST00000225247 2662 ntBASIC16.58■□□□□ 0.24
P01896 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
P01896 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01896 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC16.57■□□□□ 0.24
P01896 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P01896 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
P01896 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
P01896 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
P01896 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01896 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01896 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
P01896 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01896 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
P01896 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
P01896 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
P01896 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01896 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01896 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
P01896 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
P01896 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
P01896 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
P01896 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01896 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01896 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
P01896 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
P01896 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
P01896 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
P01896 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
P01896 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
P01896 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P01896 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01896 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P01896 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01896 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
P01896 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
P01896 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
P01896 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
P01896 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
P01896 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
P01896 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01896 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
P01896 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
P01896 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms