Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NgfP01139 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.28■■□□□ 1
NgfP01139 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.28■■□□□ 1
NgfP01139 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.28■■□□□ 1
NgfP01139 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.27■■□□□ 1
NgfP01139 Gm37136-201ENSMUST00000194368 194 ntBASIC21.27■■□□□ 1
NgfP01139 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.27■■□□□ 1
NgfP01139 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.27■■□□□ 1
NgfP01139 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NgfP01139 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
NgfP01139 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.26■□□□□ 0.99
NgfP01139 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
NgfP01139 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.26■□□□□ 0.99
NgfP01139 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.25■□□□□ 0.99
NgfP01139 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NgfP01139 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
NgfP01139 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
NgfP01139 Gm4799-201ENSMUST00000095396 657 ntBASIC21.25■□□□□ 0.99
NgfP01139 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
NgfP01139 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
NgfP01139 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.23■□□□□ 0.99
NgfP01139 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.23■□□□□ 0.99
NgfP01139 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
NgfP01139 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
NgfP01139 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC21.23■□□□□ 0.99
NgfP01139 Mir3960-201ENSMUST00000198213 73 ntBASIC21.22■□□□□ 0.99
NgfP01139 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
NgfP01139 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
NgfP01139 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.21■□□□□ 0.99
NgfP01139 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
NgfP01139 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.99
NgfP01139 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
NgfP01139 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.2■□□□□ 0.98
NgfP01139 Scarna2-201ENSMUST00000157560 414 ntBASIC21.2■□□□□ 0.98
NgfP01139 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NgfP01139 Gm9806-201ENSMUST00000051080 552 ntBASIC21.18■□□□□ 0.98
NgfP01139 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NgfP01139 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NgfP01139 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
NgfP01139 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.17■□□□□ 0.98
NgfP01139 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.17■□□□□ 0.98
NgfP01139 Gm11687-201ENSMUST00000118911 886 ntBASIC21.16■□□□□ 0.98
NgfP01139 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.16■□□□□ 0.98
NgfP01139 Gm45364-201ENSMUST00000210883 159 ntBASIC21.16■□□□□ 0.98
NgfP01139 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NgfP01139 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NgfP01139 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NgfP01139 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NgfP01139 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
NgfP01139 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NgfP01139 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
NgfP01139 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.14■□□□□ 0.98
NgfP01139 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NgfP01139 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NgfP01139 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NgfP01139 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
NgfP01139 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NgfP01139 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NgfP01139 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NgfP01139 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NgfP01139 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NgfP01139 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NgfP01139 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.11■□□□□ 0.97
NgfP01139 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
NgfP01139 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NgfP01139 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
NgfP01139 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NgfP01139 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NgfP01139 Gm16437-201ENSMUST00000025669 507 ntBASIC21.09■□□□□ 0.97
NgfP01139 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NgfP01139 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
NgfP01139 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NgfP01139 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.08■□□□□ 0.97
NgfP01139 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
NgfP01139 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.07■□□□□ 0.96
NgfP01139 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.07■□□□□ 0.96
NgfP01139 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.07■□□□□ 0.96
NgfP01139 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NgfP01139 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NgfP01139 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NgfP01139 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NgfP01139 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.04■□□□□ 0.96
NgfP01139 Gm12366-201ENSMUST00000121722 873 ntBASIC21.04■□□□□ 0.96
NgfP01139 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.04■□□□□ 0.96
NgfP01139 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC21.04■□□□□ 0.96
NgfP01139 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.04■□□□□ 0.96
NgfP01139 Gm5786-201ENSMUST00000085368 882 ntBASIC21.04■□□□□ 0.96
NgfP01139 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NgfP01139 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NgfP01139 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
NgfP01139 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NgfP01139 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
NgfP01139 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.02■□□□□ 0.96
NgfP01139 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NgfP01139 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NgfP01139 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21■□□□□ 0.95
NgfP01139 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NgfP01139 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
NgfP01139 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.99■□□□□ 0.95
NgfP01139 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms