Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Best1O88870 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Best1O88870 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Best1O88870 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Best1O88870 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.04■■□□□ 1.28
Best1O88870 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Best1O88870 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Best1O88870 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Best1O88870 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Best1O88870 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Best1O88870 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23■■□□□ 1.27
Best1O88870 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Best1O88870 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Best1O88870 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23■■□□□ 1.27
Best1O88870 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Best1O88870 Gm37136-201ENSMUST00000194368 194 ntBASIC22.99■■□□□ 1.27
Best1O88870 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC22.99■■□□□ 1.27
Best1O88870 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Best1O88870 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Best1O88870 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Best1O88870 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Best1O88870 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Best1O88870 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Best1O88870 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Best1O88870 Amer2-203ENSMUST00000225247 2662 ntBASIC22.96■■□□□ 1.27
Best1O88870 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Best1O88870 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Best1O88870 AC167019.3-201ENSMUST00000228225 1266 ntBASIC22.95■■□□□ 1.26
Best1O88870 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Best1O88870 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.94■■□□□ 1.26
Best1O88870 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Best1O88870 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Best1O88870 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Best1O88870 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Best1O88870 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
Best1O88870 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Best1O88870 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
Best1O88870 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.91■■□□□ 1.26
Best1O88870 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Best1O88870 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Best1O88870 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Best1O88870 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Best1O88870 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
Best1O88870 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Best1O88870 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.87■■□□□ 1.25
Best1O88870 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Best1O88870 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
Best1O88870 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Best1O88870 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
Best1O88870 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Best1O88870 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Best1O88870 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Best1O88870 Gm4799-201ENSMUST00000095396 657 ntBASIC22.84■■□□□ 1.25
Best1O88870 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.83■■□□□ 1.25
Best1O88870 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.83■■□□□ 1.25
Best1O88870 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Best1O88870 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Best1O88870 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Best1O88870 Gm6311-201ENSMUST00000073790 878 ntBASIC22.82■■□□□ 1.24
Best1O88870 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Best1O88870 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Best1O88870 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Best1O88870 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.81■■□□□ 1.24
Best1O88870 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Best1O88870 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.8■■□□□ 1.24
Best1O88870 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.79■■□□□ 1.24
Best1O88870 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.79■■□□□ 1.24
Best1O88870 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Best1O88870 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.79■■□□□ 1.24
Best1O88870 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.79■■□□□ 1.24
Best1O88870 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Best1O88870 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Best1O88870 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.76■■□□□ 1.23
Best1O88870 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.76■■□□□ 1.23
Best1O88870 Mir3960-201ENSMUST00000198213 73 ntBASIC22.76■■□□□ 1.23
Best1O88870 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.76■■□□□ 1.23
Best1O88870 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.75■■□□□ 1.23
Best1O88870 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.75■■□□□ 1.23
Best1O88870 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Best1O88870 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.74■■□□□ 1.23
Best1O88870 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Best1O88870 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.74■■□□□ 1.23
Best1O88870 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Best1O88870 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.72■■□□□ 1.23
Best1O88870 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Best1O88870 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Best1O88870 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.71■■□□□ 1.23
Best1O88870 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Best1O88870 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Best1O88870 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.7■■□□□ 1.22
Best1O88870 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Best1O88870 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Best1O88870 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.7■■□□□ 1.22
Best1O88870 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Best1O88870 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Best1O88870 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Best1O88870 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Best1O88870 Gm11175-201ENSMUST00000116172 543 ntBASIC22.67■■□□□ 1.22
Best1O88870 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.67■■□□□ 1.22
Best1O88870 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms