Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.74■□□□□ 0.91
Slc28a2O88627 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc28a2O88627 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Slc28a2O88627 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Slc28a2O88627 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Slc28a2O88627 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Slc28a2O88627 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.71■□□□□ 0.91
Slc28a2O88627 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc28a2O88627 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc28a2O88627 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Slc28a2O88627 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Slc28a2O88627 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc28a2O88627 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Slc28a2O88627 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Slc28a2O88627 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc28a2O88627 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.69■□□□□ 0.9
Slc28a2O88627 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Slc28a2O88627 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Slc28a2O88627 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Slc28a2O88627 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Slc28a2O88627 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.66■□□□□ 0.9
Slc28a2O88627 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.66■□□□□ 0.9
Slc28a2O88627 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Slc28a2O88627 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a2O88627 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a2O88627 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a2O88627 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a2O88627 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a2O88627 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a2O88627 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Slc28a2O88627 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc28a2O88627 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.64■□□□□ 0.89
Slc28a2O88627 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc28a2O88627 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc28a2O88627 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc28a2O88627 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a2O88627 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a2O88627 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Slc28a2O88627 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slc28a2O88627 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a2O88627 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a2O88627 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a2O88627 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc28a2O88627 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.61■□□□□ 0.89
Slc28a2O88627 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.61■□□□□ 0.89
Slc28a2O88627 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc28a2O88627 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.6■□□□□ 0.89
Slc28a2O88627 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a2O88627 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a2O88627 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc28a2O88627 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc28a2O88627 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Slc28a2O88627 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.59■□□□□ 0.89
Slc28a2O88627 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc28a2O88627 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc28a2O88627 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc28a2O88627 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc28a2O88627 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Slc28a2O88627 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc28a2O88627 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Slc28a2O88627 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc28a2O88627 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc28a2O88627 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Slc28a2O88627 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Slc28a2O88627 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc28a2O88627 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc28a2O88627 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Slc28a2O88627 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Slc28a2O88627 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Slc28a2O88627 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc28a2O88627 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Slc28a2O88627 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.52■□□□□ 0.88
Slc28a2O88627 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Slc28a2O88627 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Slc28a2O88627 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
Slc28a2O88627 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc28a2O88627 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc28a2O88627 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc28a2O88627 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc28a2O88627 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Slc28a2O88627 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Slc28a2O88627 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc28a2O88627 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Slc28a2O88627 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc28a2O88627 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Slc28a2O88627 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc28a2O88627 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc28a2O88627 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Slc28a2O88627 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc28a2O88627 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc28a2O88627 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc28a2O88627 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc28a2O88627 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Slc28a2O88627 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Slc28a2O88627 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc28a2O88627 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Slc28a2O88627 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Slc28a2O88627 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Slc28a2O88627 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms