Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cacna1hO88427 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cacna1hO88427 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cacna1hO88427 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
Cacna1hO88427 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cacna1hO88427 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cacna1hO88427 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Cacna1hO88427 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cacna1hO88427 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cacna1hO88427 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.96■■□□□ 1.43
Cacna1hO88427 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.96■■□□□ 1.43
Cacna1hO88427 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.96■■□□□ 1.43
Cacna1hO88427 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cacna1hO88427 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.43
Cacna1hO88427 Rps24-207ENSMUST00000224568 714 ntBASIC23.95■■□□□ 1.42
Cacna1hO88427 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cacna1hO88427 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cacna1hO88427 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cacna1hO88427 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC23.94■■□□□ 1.42
Cacna1hO88427 AC093043.1-201ENSMUST00000226700 898 ntBASIC23.94■■□□□ 1.42
Cacna1hO88427 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cacna1hO88427 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cacna1hO88427 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC23.93■■□□□ 1.42
Cacna1hO88427 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cacna1hO88427 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cacna1hO88427 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cacna1hO88427 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cacna1hO88427 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Cacna1hO88427 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cacna1hO88427 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cacna1hO88427 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC23.92■■□□□ 1.42
Cacna1hO88427 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Cacna1hO88427 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Cacna1hO88427 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cacna1hO88427 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Cacna1hO88427 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cacna1hO88427 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
Cacna1hO88427 Mir3960-201ENSMUST00000198213 73 ntBASIC23.87■■□□□ 1.41
Cacna1hO88427 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cacna1hO88427 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Cacna1hO88427 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.86■■□□□ 1.41
Cacna1hO88427 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cacna1hO88427 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Cacna1hO88427 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Cacna1hO88427 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Cacna1hO88427 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Cacna1hO88427 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cacna1hO88427 Gm45102-201ENSMUST00000207427 857 ntBASIC23.84■■□□□ 1.41
Cacna1hO88427 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Cacna1hO88427 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.83■■□□□ 1.41
Cacna1hO88427 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Cacna1hO88427 Gm15820-201ENSMUST00000201566 728 ntBASIC23.83■■□□□ 1.4
Cacna1hO88427 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Cacna1hO88427 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.82■■□□□ 1.4
Cacna1hO88427 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.82■■□□□ 1.4
Cacna1hO88427 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Cacna1hO88427 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cacna1hO88427 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.81■■□□□ 1.4
Cacna1hO88427 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Cacna1hO88427 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Cacna1hO88427 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cacna1hO88427 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cacna1hO88427 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Cacna1hO88427 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.8■■□□□ 1.4
Cacna1hO88427 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.79■■□□□ 1.4
Cacna1hO88427 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cacna1hO88427 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cacna1hO88427 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cacna1hO88427 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
Cacna1hO88427 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Cacna1hO88427 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cacna1hO88427 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Cacna1hO88427 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cacna1hO88427 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Cacna1hO88427 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.78■■□□□ 1.4
Cacna1hO88427 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cacna1hO88427 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cacna1hO88427 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.77■■□□□ 1.4
Cacna1hO88427 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Cacna1hO88427 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cacna1hO88427 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.77■■□□□ 1.4
Cacna1hO88427 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.77■■□□□ 1.4
Cacna1hO88427 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cacna1hO88427 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cacna1hO88427 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.76■■□□□ 1.39
Cacna1hO88427 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cacna1hO88427 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cacna1hO88427 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Cacna1hO88427 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.74■■□□□ 1.39
Cacna1hO88427 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.73■■□□□ 1.39
Cacna1hO88427 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cacna1hO88427 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cacna1hO88427 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Cacna1hO88427 Gm30023-201ENSMUST00000197970 889 ntBASIC23.73■■□□□ 1.39
Cacna1hO88427 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cacna1hO88427 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cacna1hO88427 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cacna1hO88427 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.71■■□□□ 1.39
Cacna1hO88427 Serp2-204ENSMUST00000228055 705 ntBASIC23.71■■□□□ 1.39
Cacna1hO88427 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms