Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm9806-201ENSMUST00000051080 552 ntBASIC22.8■■□□□ 1.24
Tgfbr3O88393 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.8■■□□□ 1.24
Tgfbr3O88393 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tgfbr3O88393 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Gm11687-201ENSMUST00000118911 886 ntBASIC22.79■■□□□ 1.24
Tgfbr3O88393 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tgfbr3O88393 Gm4799-201ENSMUST00000095396 657 ntBASIC22.78■■□□□ 1.24
Tgfbr3O88393 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tgfbr3O88393 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tgfbr3O88393 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tgfbr3O88393 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tgfbr3O88393 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tgfbr3O88393 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.76■■□□□ 1.23
Tgfbr3O88393 Gm16437-201ENSMUST00000025669 507 ntBASIC22.76■■□□□ 1.23
Tgfbr3O88393 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tgfbr3O88393 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tgfbr3O88393 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.75■■□□□ 1.23
Tgfbr3O88393 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.74■■□□□ 1.23
Tgfbr3O88393 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.73■■□□□ 1.23
Tgfbr3O88393 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Gm12366-201ENSMUST00000121722 873 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.73■■□□□ 1.23
Tgfbr3O88393 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.73■■□□□ 1.23
Tgfbr3O88393 Mir3960-201ENSMUST00000198213 73 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Gm5786-201ENSMUST00000085368 882 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Tgfbr3O88393 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Tgfbr3O88393 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tgfbr3O88393 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.7■■□□□ 1.22
Tgfbr3O88393 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tgfbr3O88393 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tgfbr3O88393 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.69■■□□□ 1.22
Tgfbr3O88393 Gm45364-201ENSMUST00000210883 159 ntBASIC22.69■■□□□ 1.22
Tgfbr3O88393 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Gm37136-201ENSMUST00000194368 194 ntBASIC22.68■■□□□ 1.22
Tgfbr3O88393 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Tgfbr3O88393 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.67■■□□□ 1.22
Tgfbr3O88393 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.65■■□□□ 1.22
Tgfbr3O88393 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Tgfbr3O88393 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.65■■□□□ 1.22
Tgfbr3O88393 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tgfbr3O88393 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.63■■□□□ 1.21
Tgfbr3O88393 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Tgfbr3O88393 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tgfbr3O88393 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Tgfbr3O88393 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tgfbr3O88393 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tgfbr3O88393 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tgfbr3O88393 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Tgfbr3O88393 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tgfbr3O88393 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Gm27502-201ENSMUST00000183495 199 ntBASIC22.58■■□□□ 1.21
Tgfbr3O88393 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.58■■□□□ 1.21
Tgfbr3O88393 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tgfbr3O88393 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Tgfbr3O88393 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tgfbr3O88393 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.56■■□□□ 1.2
Tgfbr3O88393 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.55■■□□□ 1.2
Tgfbr3O88393 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tgfbr3O88393 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tgfbr3O88393 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Tgfbr3O88393 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.54■■□□□ 1.2
Tgfbr3O88393 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tgfbr3O88393 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.53■■□□□ 1.2
Tgfbr3O88393 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Gm7332-201ENSMUST00000118351 454 ntBASIC22.51■■□□□ 1.19
Tgfbr3O88393 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tgfbr3O88393 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.51■■□□□ 1.19
Tgfbr3O88393 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms