Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm9806-201ENSMUST00000051080 552 ntBASIC22.8■■□□□ 1.24
Tgfbr3O88393 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.8■■□□□ 1.24
Tgfbr3O88393 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Tgfbr3O88393 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Gm11687-201ENSMUST00000118911 886 ntBASIC22.79■■□□□ 1.24
Tgfbr3O88393 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Tgfbr3O88393 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Tgfbr3O88393 Gm4799-201ENSMUST00000095396 657 ntBASIC22.78■■□□□ 1.24
Tgfbr3O88393 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Tgfbr3O88393 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tgfbr3O88393 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tgfbr3O88393 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Tgfbr3O88393 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Tgfbr3O88393 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.76■■□□□ 1.23
Tgfbr3O88393 Gm16437-201ENSMUST00000025669 507 ntBASIC22.76■■□□□ 1.23
Tgfbr3O88393 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Tgfbr3O88393 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Tgfbr3O88393 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.75■■□□□ 1.23
Tgfbr3O88393 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.74■■□□□ 1.23
Tgfbr3O88393 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.73■■□□□ 1.23
Tgfbr3O88393 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Gm12366-201ENSMUST00000121722 873 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.73■■□□□ 1.23
Tgfbr3O88393 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.73■■□□□ 1.23
Tgfbr3O88393 Mir3960-201ENSMUST00000198213 73 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Gm5786-201ENSMUST00000085368 882 ntBASIC22.73■■□□□ 1.23
Tgfbr3O88393 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Tgfbr3O88393 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Tgfbr3O88393 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Tgfbr3O88393 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Tgfbr3O88393 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.7■■□□□ 1.22
Tgfbr3O88393 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Tgfbr3O88393 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Tgfbr3O88393 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.69■■□□□ 1.22
Tgfbr3O88393 Gm45364-201ENSMUST00000210883 159 ntBASIC22.69■■□□□ 1.22
Tgfbr3O88393 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Gm37136-201ENSMUST00000194368 194 ntBASIC22.68■■□□□ 1.22
Tgfbr3O88393 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Tgfbr3O88393 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Tgfbr3O88393 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC22.67■■□□□ 1.22
Tgfbr3O88393 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC22.65■■□□□ 1.22
Tgfbr3O88393 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Tgfbr3O88393 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.65■■□□□ 1.22
Tgfbr3O88393 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Tgfbr3O88393 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.63■■□□□ 1.21
Tgfbr3O88393 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Tgfbr3O88393 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tgfbr3O88393 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Tgfbr3O88393 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
Tgfbr3O88393 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Tgfbr3O88393 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tgfbr3O88393 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Tgfbr3O88393 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Tgfbr3O88393 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Tgfbr3O88393 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Gm27502-201ENSMUST00000183495 199 ntBASIC22.58■■□□□ 1.21
Tgfbr3O88393 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tgfbr3O88393 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.58■■□□□ 1.21
Tgfbr3O88393 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Tgfbr3O88393 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Tgfbr3O88393 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Tgfbr3O88393 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.56■■□□□ 1.2
Tgfbr3O88393 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.55■■□□□ 1.2
Tgfbr3O88393 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Tgfbr3O88393 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Tgfbr3O88393 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
Tgfbr3O88393 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.54■■□□□ 1.2
Tgfbr3O88393 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Tgfbr3O88393 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC22.53■■□□□ 1.2
Tgfbr3O88393 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Tgfbr3O88393 Gm7332-201ENSMUST00000118351 454 ntBASIC22.51■■□□□ 1.19
Tgfbr3O88393 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tgfbr3O88393 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.51■■□□□ 1.19
Tgfbr3O88393 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms