Protein–RNA interactions for Protein: O54943

Per2, Period circadian protein homolog 2, mousemouse

Predictions only

Length 1,257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Per2O54943 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Per2O54943 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC24.55■■□□□ 1.52
Per2O54943 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Per2O54943 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Per2O54943 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Per2O54943 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Per2O54943 AC153890.1-201ENSMUST00000220021 2469 ntBASIC24.54■■□□□ 1.52
Per2O54943 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Per2O54943 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Per2O54943 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Per2O54943 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Per2O54943 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Per2O54943 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Per2O54943 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Per2O54943 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC24.5■■□□□ 1.51
Per2O54943 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.5■■□□□ 1.51
Per2O54943 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC24.5■■□□□ 1.51
Per2O54943 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.5■■□□□ 1.51
Per2O54943 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
Per2O54943 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Per2O54943 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Per2O54943 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Per2O54943 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Per2O54943 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Per2O54943 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Per2O54943 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Per2O54943 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC24.47■■□□□ 1.51
Per2O54943 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Per2O54943 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
Per2O54943 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Per2O54943 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Per2O54943 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
Per2O54943 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Per2O54943 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Per2O54943 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC24.44■■□□□ 1.5
Per2O54943 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Per2O54943 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Per2O54943 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.44■■□□□ 1.5
Per2O54943 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Per2O54943 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Per2O54943 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC24.42■■□□□ 1.5
Per2O54943 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
Per2O54943 Nkain2-201ENSMUST00000092602 558 ntBASIC24.42■■□□□ 1.5
Per2O54943 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
Per2O54943 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Per2O54943 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Per2O54943 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
Per2O54943 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Per2O54943 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Per2O54943 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Per2O54943 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Per2O54943 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
Per2O54943 Gm37847-201ENSMUST00000192163 1497 ntBASIC24.36■■□□□ 1.49
Per2O54943 Gm31748-201ENSMUST00000194938 1497 ntBASIC24.36■■□□□ 1.49
Per2O54943 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
Per2O54943 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Per2O54943 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
Per2O54943 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC24.35■■□□□ 1.49
Per2O54943 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
Per2O54943 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.35■■□□□ 1.49
Per2O54943 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Per2O54943 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC24.34■■□□□ 1.49
Per2O54943 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC24.34■■□□□ 1.49
Per2O54943 Gm42809-201ENSMUST00000198429 1138 ntBASIC24.34■■□□□ 1.49
Per2O54943 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
Per2O54943 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC24.33■■□□□ 1.49
Per2O54943 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Per2O54943 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC24.32■■□□□ 1.48
Per2O54943 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Per2O54943 Particl-201ENSMUST00000205370 1560 ntBASIC24.32■■□□□ 1.48
Per2O54943 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Per2O54943 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Per2O54943 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC24.31■■□□□ 1.48
Per2O54943 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Per2O54943 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Per2O54943 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Per2O54943 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Per2O54943 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC24.29■■□□□ 1.48
Per2O54943 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Per2O54943 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC24.28■■□□□ 1.48
Per2O54943 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
Per2O54943 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Per2O54943 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Per2O54943 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC24.26■■□□□ 1.47
Per2O54943 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Per2O54943 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC24.26■■□□□ 1.47
Per2O54943 Gm9939-201ENSMUST00000067161 1154 ntBASIC24.26■■□□□ 1.47
Per2O54943 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Per2O54943 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Per2O54943 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.25■■□□□ 1.47
Per2O54943 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Per2O54943 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC24.25■■□□□ 1.47
Per2O54943 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Per2O54943 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Per2O54943 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Per2O54943 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Per2O54943 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Per2O54943 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Per2O54943 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Per2O54943 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms