Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Dkk1O54908 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Dkk1O54908 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC20.36■□□□□ 0.85
Dkk1O54908 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dkk1O54908 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Dkk1O54908 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dkk1O54908 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dkk1O54908 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dkk1O54908 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dkk1O54908 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dkk1O54908 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dkk1O54908 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Dkk1O54908 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Dkk1O54908 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Dkk1O54908 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Dkk1O54908 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Dkk1O54908 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Dkk1O54908 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Dkk1O54908 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Dkk1O54908 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dkk1O54908 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Dkk1O54908 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Dkk1O54908 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Dkk1O54908 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dkk1O54908 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Dkk1O54908 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dkk1O54908 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dkk1O54908 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Dkk1O54908 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dkk1O54908 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Dkk1O54908 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Dkk1O54908 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Dkk1O54908 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkk1O54908 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Dkk1O54908 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Dkk1O54908 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Dkk1O54908 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Dkk1O54908 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Dkk1O54908 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.23■□□□□ 0.83
Dkk1O54908 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dkk1O54908 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Dkk1O54908 Gm19891-201ENSMUST00000189771 303 ntBASIC20.21■□□□□ 0.83
Dkk1O54908 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dkk1O54908 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Dkk1O54908 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Dkk1O54908 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Dkk1O54908 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Dkk1O54908 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Dkk1O54908 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dkk1O54908 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Dkk1O54908 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Dkk1O54908 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkk1O54908 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.18■□□□□ 0.82
Dkk1O54908 Particl-201ENSMUST00000205370 1560 ntBASIC20.18■□□□□ 0.82
Dkk1O54908 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Dkk1O54908 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dkk1O54908 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.17■□□□□ 0.82
Dkk1O54908 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.17■□□□□ 0.82
Dkk1O54908 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Dkk1O54908 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Dkk1O54908 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Dkk1O54908 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dkk1O54908 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC20.16■□□□□ 0.82
Dkk1O54908 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
Dkk1O54908 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dkk1O54908 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.16■□□□□ 0.82
Dkk1O54908 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.16■□□□□ 0.82
Dkk1O54908 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Dkk1O54908 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Dkk1O54908 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Dkk1O54908 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Dkk1O54908 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dkk1O54908 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Dkk1O54908 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Dkk1O54908 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dkk1O54908 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Dkk1O54908 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Dkk1O54908 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Dkk1O54908 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.11■□□□□ 0.81
Dkk1O54908 Gm37136-201ENSMUST00000194368 194 ntBASIC20.11■□□□□ 0.81
Dkk1O54908 Gm7432-201ENSMUST00000210343 879 ntBASIC20.11■□□□□ 0.81
Dkk1O54908 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Dkk1O54908 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.1■□□□□ 0.81
Dkk1O54908 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.09■□□□□ 0.81
Dkk1O54908 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dkk1O54908 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Dkk1O54908 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Dkk1O54908 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dkk1O54908 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Dkk1O54908 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Dkk1O54908 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dkk1O54908 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Dkk1O54908 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Dkk1O54908 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Dkk1O54908 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Dkk1O54908 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.05■□□□□ 0.8
Dkk1O54908 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Dkk1O54908 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Dkk1O54908 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Dkk1O54908 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms