Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Abca4O35600 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC23.26■■□□□ 1.31
Abca4O35600 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Abca4O35600 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.25■■□□□ 1.31
Abca4O35600 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Abca4O35600 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Abca4O35600 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Abca4O35600 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Abca4O35600 Rps24-207ENSMUST00000224568 714 ntBASIC23.21■■□□□ 1.31
Abca4O35600 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Abca4O35600 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Abca4O35600 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.21■■□□□ 1.31
Abca4O35600 Serp2-204ENSMUST00000228055 705 ntBASIC23.2■■□□□ 1.3
Abca4O35600 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Abca4O35600 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Abca4O35600 Gm15820-201ENSMUST00000201566 728 ntBASIC23.2■■□□□ 1.3
Abca4O35600 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Abca4O35600 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Abca4O35600 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Abca4O35600 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Abca4O35600 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Abca4O35600 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Abca4O35600 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Abca4O35600 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Abca4O35600 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Abca4O35600 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC23.17■■□□□ 1.3
Abca4O35600 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Abca4O35600 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Abca4O35600 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.15■■□□□ 1.3
Abca4O35600 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Abca4O35600 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Abca4O35600 Gm45102-201ENSMUST00000207427 857 ntBASIC23.15■■□□□ 1.3
Abca4O35600 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Abca4O35600 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Abca4O35600 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC23.12■■□□□ 1.29
Abca4O35600 Gm14117-201ENSMUST00000122417 843 ntBASIC23.11■■□□□ 1.29
Abca4O35600 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.11■■□□□ 1.29
Abca4O35600 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Abca4O35600 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Abca4O35600 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Abca4O35600 Mir3960-201ENSMUST00000198213 73 ntBASIC23.1■■□□□ 1.29
Abca4O35600 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Abca4O35600 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Abca4O35600 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Abca4O35600 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Abca4O35600 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.09■■□□□ 1.29
Abca4O35600 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.09■■□□□ 1.29
Abca4O35600 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Abca4O35600 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.08■■□□□ 1.29
Abca4O35600 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Abca4O35600 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC23.08■■□□□ 1.28
Abca4O35600 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
Abca4O35600 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Abca4O35600 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Abca4O35600 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Abca4O35600 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Abca4O35600 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.06■■□□□ 1.28
Abca4O35600 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.05■■□□□ 1.28
Abca4O35600 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC23.05■■□□□ 1.28
Abca4O35600 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Abca4O35600 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.05■■□□□ 1.28
Abca4O35600 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Abca4O35600 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Abca4O35600 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Abca4O35600 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Abca4O35600 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.02■■□□□ 1.28
Abca4O35600 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Abca4O35600 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.02■■□□□ 1.28
Abca4O35600 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Abca4O35600 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Abca4O35600 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Abca4O35600 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Abca4O35600 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Abca4O35600 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Abca4O35600 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Abca4O35600 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23■■□□□ 1.27
Abca4O35600 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Abca4O35600 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Abca4O35600 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Abca4O35600 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Abca4O35600 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Abca4O35600 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Abca4O35600 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.98■■□□□ 1.27
Abca4O35600 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Abca4O35600 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Abca4O35600 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Abca4O35600 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Abca4O35600 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Abca4O35600 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC22.97■■□□□ 1.27
Abca4O35600 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Abca4O35600 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.97■■□□□ 1.27
Abca4O35600 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Abca4O35600 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.96■■□□□ 1.27
Abca4O35600 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Abca4O35600 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.95■■□□□ 1.26
Abca4O35600 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Abca4O35600 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Abca4O35600 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Abca4O35600 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Abca4O35600 Gm9959-201ENSMUST00000068277 390 ntBASIC22.93■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms