Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC29.26■■■□□ 2.27
Trim34bJ3QNR8 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Trim34bJ3QNR8 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC29.25■■■□□ 2.27
Trim34bJ3QNR8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Trim34bJ3QNR8 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC29.24■■■□□ 2.27
Trim34bJ3QNR8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Trim34bJ3QNR8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC29.22■■■□□ 2.27
Trim34bJ3QNR8 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Trim34bJ3QNR8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Trim34bJ3QNR8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
Trim34bJ3QNR8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Trim34bJ3QNR8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
Trim34bJ3QNR8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
Trim34bJ3QNR8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Trim34bJ3QNR8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Trim34bJ3QNR8 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC29.18■■■□□ 2.26
Trim34bJ3QNR8 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Trim34bJ3QNR8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC29.17■■■□□ 2.26
Trim34bJ3QNR8 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Trim34bJ3QNR8 Gm37136-201ENSMUST00000194368 194 ntBASIC29.16■■■□□ 2.26
Trim34bJ3QNR8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
Trim34bJ3QNR8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Trim34bJ3QNR8 Gm4799-201ENSMUST00000095396 657 ntBASIC29.15■■■□□ 2.26
Trim34bJ3QNR8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC29.14■■■□□ 2.26
Trim34bJ3QNR8 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Trim34bJ3QNR8 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Trim34bJ3QNR8 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Trim34bJ3QNR8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC29.13■■■□□ 2.25
Trim34bJ3QNR8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Trim34bJ3QNR8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC29.13■■■□□ 2.25
Trim34bJ3QNR8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Trim34bJ3QNR8 Gm6206-201ENSMUST00000133472 2199 ntBASIC29.12■■■□□ 2.25
Trim34bJ3QNR8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
Trim34bJ3QNR8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC29.11■■■□□ 2.25
Trim34bJ3QNR8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Trim34bJ3QNR8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Trim34bJ3QNR8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Trim34bJ3QNR8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Trim34bJ3QNR8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC29.08■■■□□ 2.25
Trim34bJ3QNR8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Trim34bJ3QNR8 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Trim34bJ3QNR8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.24
Trim34bJ3QNR8 AC154454.1-201ENSMUST00000225253 216 ntBASIC29.07■■■□□ 2.24
Trim34bJ3QNR8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Trim34bJ3QNR8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Trim34bJ3QNR8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC29.05■■■□□ 2.24
Trim34bJ3QNR8 Mir3960-201ENSMUST00000198213 73 ntBASIC29.04■■■□□ 2.24
Trim34bJ3QNR8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC29.04■■■□□ 2.24
Trim34bJ3QNR8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC29.03■■■□□ 2.24
Trim34bJ3QNR8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Trim34bJ3QNR8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
Trim34bJ3QNR8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trim34bJ3QNR8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trim34bJ3QNR8 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.02■■■□□ 2.24
Trim34bJ3QNR8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Trim34bJ3QNR8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC29.01■■■□□ 2.23
Trim34bJ3QNR8 Pkd1-207ENSMUST00000228550 1050 ntBASIC29.01■■■□□ 2.23
Trim34bJ3QNR8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Trim34bJ3QNR8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Trim34bJ3QNR8 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Trim34bJ3QNR8 Scarna2-201ENSMUST00000157560 414 ntBASIC29■■■□□ 2.23
Trim34bJ3QNR8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Trim34bJ3QNR8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Trim34bJ3QNR8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Trim34bJ3QNR8 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Trim34bJ3QNR8 Cap2-205ENSMUST00000225824 1634 ntBASIC28.98■■■□□ 2.23
Trim34bJ3QNR8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trim34bJ3QNR8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trim34bJ3QNR8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC28.97■■■□□ 2.23
Trim34bJ3QNR8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Trim34bJ3QNR8 Gm45364-201ENSMUST00000210883 159 ntBASIC28.96■■■□□ 2.23
Trim34bJ3QNR8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC28.96■■■□□ 2.23
Trim34bJ3QNR8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Trim34bJ3QNR8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.23
Trim34bJ3QNR8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.95■■■□□ 2.22
Trim34bJ3QNR8 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.94■■■□□ 2.22
Trim34bJ3QNR8 Gm9806-201ENSMUST00000051080 552 ntBASIC28.94■■■□□ 2.22
Trim34bJ3QNR8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC28.94■■■□□ 2.22
Trim34bJ3QNR8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
Trim34bJ3QNR8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Trim34bJ3QNR8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Trim34bJ3QNR8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Trim34bJ3QNR8 Gm11687-201ENSMUST00000118911 886 ntBASIC28.92■■■□□ 2.22
Trim34bJ3QNR8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Trim34bJ3QNR8 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Trim34bJ3QNR8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Trim34bJ3QNR8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC28.91■■■□□ 2.22
Trim34bJ3QNR8 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Trim34bJ3QNR8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Trim34bJ3QNR8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Trim34bJ3QNR8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Trim34bJ3QNR8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Trim34bJ3QNR8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC28.89■■■□□ 2.22
Trim34bJ3QNR8 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Trim34bJ3QNR8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC28.88■■■□□ 2.21
Trim34bJ3QNR8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC28.88■■■□□ 2.21
Trim34bJ3QNR8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
Trim34bJ3QNR8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Trim34bJ3QNR8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Trim34bJ3QNR8 Gm16437-201ENSMUST00000025669 507 ntBASIC28.87■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms