Protein–RNA interactions for Protein: E9Q7P2

Cacna1i, Voltage-dependent T-type calcium channel subunit alpha, mousemouse

Predictions only

Length 2,199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1iE9Q7P2 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1iE9Q7P2 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1iE9Q7P2 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Cacna1iE9Q7P2 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cacna1iE9Q7P2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cacna1iE9Q7P2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.42■□□□□ 0.7
Cacna1iE9Q7P2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cacna1iE9Q7P2 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.42■□□□□ 0.7
Cacna1iE9Q7P2 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1iE9Q7P2 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cacna1iE9Q7P2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1iE9Q7P2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacna1iE9Q7P2 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1iE9Q7P2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.4■□□□□ 0.7
Cacna1iE9Q7P2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1iE9Q7P2 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacna1iE9Q7P2 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1iE9Q7P2 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacna1iE9Q7P2 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacna1iE9Q7P2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1iE9Q7P2 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacna1iE9Q7P2 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.36■□□□□ 0.69
Cacna1iE9Q7P2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1iE9Q7P2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1iE9Q7P2 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Cacna1iE9Q7P2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC19.34■□□□□ 0.69
Cacna1iE9Q7P2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1iE9Q7P2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1iE9Q7P2 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cacna1iE9Q7P2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cacna1iE9Q7P2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Cacna1iE9Q7P2 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Cacna1iE9Q7P2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1iE9Q7P2 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cacna1iE9Q7P2 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cacna1iE9Q7P2 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1iE9Q7P2 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cacna1iE9Q7P2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.31■□□□□ 0.68
Cacna1iE9Q7P2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.3■□□□□ 0.68
Cacna1iE9Q7P2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.3■□□□□ 0.68
Cacna1iE9Q7P2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.3■□□□□ 0.68
Cacna1iE9Q7P2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cacna1iE9Q7P2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cacna1iE9Q7P2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cacna1iE9Q7P2 Gm6311-201ENSMUST00000073790 878 ntBASIC19.27■□□□□ 0.68
Cacna1iE9Q7P2 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cacna1iE9Q7P2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cacna1iE9Q7P2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cacna1iE9Q7P2 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cacna1iE9Q7P2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1iE9Q7P2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1iE9Q7P2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1iE9Q7P2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cacna1iE9Q7P2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cacna1iE9Q7P2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1iE9Q7P2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cacna1iE9Q7P2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cacna1iE9Q7P2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Cacna1iE9Q7P2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.21■□□□□ 0.67
Cacna1iE9Q7P2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cacna1iE9Q7P2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1iE9Q7P2 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cacna1iE9Q7P2 Gm15039-201ENSMUST00000118914 875 ntBASIC19.2■□□□□ 0.66
Cacna1iE9Q7P2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cacna1iE9Q7P2 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1iE9Q7P2 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1iE9Q7P2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Cacna1iE9Q7P2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1iE9Q7P2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1iE9Q7P2 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cacna1iE9Q7P2 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cacna1iE9Q7P2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms