Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC34.55■■■■□ 3.12
Hfm1D3Z4R1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC34.55■■■■□ 3.12
Hfm1D3Z4R1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC34.55■■■■□ 3.12
Hfm1D3Z4R1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Hfm1D3Z4R1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC34.54■■■■□ 3.12
Hfm1D3Z4R1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Hfm1D3Z4R1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Hfm1D3Z4R1 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Hfm1D3Z4R1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Hfm1D3Z4R1 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC34.52■■■■□ 3.12
Hfm1D3Z4R1 Mir3960-201ENSMUST00000198213 73 ntBASIC34.51■■■■□ 3.12
Hfm1D3Z4R1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC34.51■■■■□ 3.11
Hfm1D3Z4R1 Gm27502-201ENSMUST00000183495 199 ntBASIC34.5■■■■□ 3.11
Hfm1D3Z4R1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Hfm1D3Z4R1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC34.49■■■■□ 3.11
Hfm1D3Z4R1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Hfm1D3Z4R1 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC34.47■■■■□ 3.11
Hfm1D3Z4R1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Hfm1D3Z4R1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC34.46■■■■□ 3.11
Hfm1D3Z4R1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Hfm1D3Z4R1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC34.44■■■■□ 3.1
Hfm1D3Z4R1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Hfm1D3Z4R1 Gm7332-201ENSMUST00000118351 454 ntBASIC34.42■■■■□ 3.1
Hfm1D3Z4R1 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC34.41■■■■□ 3.1
Hfm1D3Z4R1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC34.41■■■■□ 3.1
Hfm1D3Z4R1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
Hfm1D3Z4R1 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Hfm1D3Z4R1 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Hfm1D3Z4R1 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Hfm1D3Z4R1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC34.39■■■■□ 3.1
Hfm1D3Z4R1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC34.38■■■■□ 3.09
Hfm1D3Z4R1 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC34.38■■■■□ 3.09
Hfm1D3Z4R1 Gm37136-201ENSMUST00000194368 194 ntBASIC34.38■■■■□ 3.09
Hfm1D3Z4R1 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Hfm1D3Z4R1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Hfm1D3Z4R1 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Hfm1D3Z4R1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC34.35■■■■□ 3.09
Hfm1D3Z4R1 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Hfm1D3Z4R1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Hfm1D3Z4R1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Hfm1D3Z4R1 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Hfm1D3Z4R1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Hfm1D3Z4R1 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC34.33■■■■□ 3.09
Hfm1D3Z4R1 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC34.33■■■■□ 3.09
Hfm1D3Z4R1 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
Hfm1D3Z4R1 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC34.29■■■■□ 3.08
Hfm1D3Z4R1 Gm13889-201ENSMUST00000099689 1386 ntBASIC34.28■■■■□ 3.08
Hfm1D3Z4R1 Gm14523-201ENSMUST00000117260 558 ntBASIC34.28■■■■□ 3.08
Hfm1D3Z4R1 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Hfm1D3Z4R1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
Hfm1D3Z4R1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
Hfm1D3Z4R1 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC34.27■■■■□ 3.08
Hfm1D3Z4R1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC34.26■■■■□ 3.08
Hfm1D3Z4R1 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC34.25■■■■□ 3.07
Hfm1D3Z4R1 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC34.25■■■■□ 3.07
Hfm1D3Z4R1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Hfm1D3Z4R1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
Hfm1D3Z4R1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC34.23■■■■□ 3.07
Hfm1D3Z4R1 Gm12818-201ENSMUST00000117562 1349 ntBASIC34.22■■■■□ 3.07
Hfm1D3Z4R1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC34.22■■■■□ 3.07
Hfm1D3Z4R1 Gm9905-201ENSMUST00000065740 1845 ntBASIC34.22■■■■□ 3.07
Hfm1D3Z4R1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
Hfm1D3Z4R1 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
Hfm1D3Z4R1 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC34.19■■■■□ 3.06
Hfm1D3Z4R1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC34.19■■■■□ 3.06
Hfm1D3Z4R1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC34.19■■■■□ 3.06
Hfm1D3Z4R1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC34.18■■■■□ 3.06
Hfm1D3Z4R1 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC34.18■■■■□ 3.06
Hfm1D3Z4R1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC34.16■■■■□ 3.06
Hfm1D3Z4R1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC34.16■■■■□ 3.06
Hfm1D3Z4R1 AC151971.4-201ENSMUST00000214717 704 ntBASIC34.14■■■■□ 3.06
Hfm1D3Z4R1 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Hfm1D3Z4R1 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC34.13■■■■□ 3.05
Hfm1D3Z4R1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Hfm1D3Z4R1 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Hfm1D3Z4R1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC34.13■■■■□ 3.05
Hfm1D3Z4R1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC34.12■■■■□ 3.05
Hfm1D3Z4R1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC34.12■■■■□ 3.05
Hfm1D3Z4R1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC34.12■■■■□ 3.05
Hfm1D3Z4R1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Hfm1D3Z4R1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC34.11■■■■□ 3.05
Hfm1D3Z4R1 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC34.11■■■■□ 3.05
Hfm1D3Z4R1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC34.11■■■■□ 3.05
Hfm1D3Z4R1 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Hfm1D3Z4R1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC34.1■■■■□ 3.05
Hfm1D3Z4R1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
Hfm1D3Z4R1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC34.1■■■■□ 3.05
Hfm1D3Z4R1 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
Hfm1D3Z4R1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Hfm1D3Z4R1 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC34.07■■■■□ 3.04
Hfm1D3Z4R1 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC34.07■■■■□ 3.04
Hfm1D3Z4R1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC34.07■■■■□ 3.04
Hfm1D3Z4R1 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Hfm1D3Z4R1 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC34.06■■■■□ 3.04
Hfm1D3Z4R1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Hfm1D3Z4R1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC34.05■■■■□ 3.04
Hfm1D3Z4R1 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
Hfm1D3Z4R1 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC34.05■■■■□ 3.04
Hfm1D3Z4R1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC34.04■■■■□ 3.04
Hfm1D3Z4R1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC34.04■■■■□ 3.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms