Protein–RNA interactions for Protein: A0A140T8N7

Igkv6-25, Immunoglobulin kappa chain variable 6-25 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv6-25A0A140T8N7 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Igkv6-25A0A140T8N7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Igkv6-25A0A140T8N7 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Igkv6-25A0A140T8N7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv6-25A0A140T8N7 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.47■■□□□ 1.19
Igkv6-25A0A140T8N7 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.47■■□□□ 1.19
Igkv6-25A0A140T8N7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.47■■□□□ 1.19
Igkv6-25A0A140T8N7 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv6-25A0A140T8N7 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.47■■□□□ 1.19
Igkv6-25A0A140T8N7 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Igkv6-25A0A140T8N7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Igkv6-25A0A140T8N7 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Igkv6-25A0A140T8N7 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Igkv6-25A0A140T8N7 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.46■■□□□ 1.19
Igkv6-25A0A140T8N7 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.46■■□□□ 1.19
Igkv6-25A0A140T8N7 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Igkv6-25A0A140T8N7 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv6-25A0A140T8N7 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv6-25A0A140T8N7 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Igkv6-25A0A140T8N7 Gm37136-201ENSMUST00000194368 194 ntBASIC22.44■■□□□ 1.18
Igkv6-25A0A140T8N7 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
Igkv6-25A0A140T8N7 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Igkv6-25A0A140T8N7 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv6-25A0A140T8N7 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.41■■□□□ 1.18
Igkv6-25A0A140T8N7 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Igkv6-25A0A140T8N7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Igkv6-25A0A140T8N7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv6-25A0A140T8N7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv6-25A0A140T8N7 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv6-25A0A140T8N7 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Igkv6-25A0A140T8N7 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Igkv6-25A0A140T8N7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Igkv6-25A0A140T8N7 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Igkv6-25A0A140T8N7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Igkv6-25A0A140T8N7 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Igkv6-25A0A140T8N7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Igkv6-25A0A140T8N7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Igkv6-25A0A140T8N7 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Igkv6-25A0A140T8N7 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.35■■□□□ 1.17
Igkv6-25A0A140T8N7 Gm4799-201ENSMUST00000095396 657 ntBASIC22.35■■□□□ 1.17
Igkv6-25A0A140T8N7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Igkv6-25A0A140T8N7 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.34■■□□□ 1.17
Igkv6-25A0A140T8N7 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Igkv6-25A0A140T8N7 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Igkv6-25A0A140T8N7 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.34■■□□□ 1.17
Igkv6-25A0A140T8N7 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Igkv6-25A0A140T8N7 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.34■■□□□ 1.17
Igkv6-25A0A140T8N7 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.34■■□□□ 1.17
Igkv6-25A0A140T8N7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Igkv6-25A0A140T8N7 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Igkv6-25A0A140T8N7 Mir3960-201ENSMUST00000198213 73 ntBASIC22.31■■□□□ 1.16
Igkv6-25A0A140T8N7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv6-25A0A140T8N7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv6-25A0A140T8N7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv6-25A0A140T8N7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.3■■□□□ 1.16
Igkv6-25A0A140T8N7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
Igkv6-25A0A140T8N7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv6-25A0A140T8N7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv6-25A0A140T8N7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv6-25A0A140T8N7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Igkv6-25A0A140T8N7 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv6-25A0A140T8N7 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv6-25A0A140T8N7 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.28■■□□□ 1.16
Igkv6-25A0A140T8N7 Gm45364-201ENSMUST00000210883 159 ntBASIC22.28■■□□□ 1.16
Igkv6-25A0A140T8N7 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.28■■□□□ 1.16
Igkv6-25A0A140T8N7 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Igkv6-25A0A140T8N7 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Igkv6-25A0A140T8N7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Igkv6-25A0A140T8N7 Cap2-205ENSMUST00000225824 1634 ntBASIC22.26■■□□□ 1.15
Igkv6-25A0A140T8N7 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Igkv6-25A0A140T8N7 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Igkv6-25A0A140T8N7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.25■■□□□ 1.15
Igkv6-25A0A140T8N7 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.25■■□□□ 1.15
Igkv6-25A0A140T8N7 Scarna2-201ENSMUST00000157560 414 ntBASIC22.25■■□□□ 1.15
Igkv6-25A0A140T8N7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Igkv6-25A0A140T8N7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Igkv6-25A0A140T8N7 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Igkv6-25A0A140T8N7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv6-25A0A140T8N7 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv6-25A0A140T8N7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Igkv6-25A0A140T8N7 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv6-25A0A140T8N7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv6-25A0A140T8N7 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Igkv6-25A0A140T8N7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Igkv6-25A0A140T8N7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv6-25A0A140T8N7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.22■■□□□ 1.15
Igkv6-25A0A140T8N7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv6-25A0A140T8N7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv6-25A0A140T8N7 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv6-25A0A140T8N7 Gm9806-201ENSMUST00000051080 552 ntBASIC22.22■■□□□ 1.15
Igkv6-25A0A140T8N7 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv6-25A0A140T8N7 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC22.21■■□□□ 1.15
Igkv6-25A0A140T8N7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv6-25A0A140T8N7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv6-25A0A140T8N7 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
Igkv6-25A0A140T8N7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv6-25A0A140T8N7 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Igkv6-25A0A140T8N7 Amer2-203ENSMUST00000225247 2662 ntBASIC22.18■■□□□ 1.14
Igkv6-25A0A140T8N7 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.18■■□□□ 1.14
Igkv6-25A0A140T8N7 Gm11687-201ENSMUST00000118911 886 ntBASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms