Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb8A0A140LI48 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdhgb8A0A140LI48 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.98■□□□□ 0.95
Pcdhgb8A0A140LI48 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb8A0A140LI48 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb8A0A140LI48 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb8A0A140LI48 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb8A0A140LI48 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb8A0A140LI48 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb8A0A140LI48 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhgb8A0A140LI48 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb8A0A140LI48 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Pcdhgb8A0A140LI48 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC20.96■□□□□ 0.95
Pcdhgb8A0A140LI48 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhgb8A0A140LI48 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.95■□□□□ 0.94
Pcdhgb8A0A140LI48 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb8A0A140LI48 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhgb8A0A140LI48 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb8A0A140LI48 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb8A0A140LI48 Gm8503-201ENSMUST00000118131 455 ntBASIC20.94■□□□□ 0.94
Pcdhgb8A0A140LI48 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Pcdhgb8A0A140LI48 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb8A0A140LI48 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb8A0A140LI48 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhgb8A0A140LI48 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhgb8A0A140LI48 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhgb8A0A140LI48 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC20.93■□□□□ 0.94
Pcdhgb8A0A140LI48 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb8A0A140LI48 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb8A0A140LI48 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb8A0A140LI48 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhgb8A0A140LI48 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb8A0A140LI48 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb8A0A140LI48 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb8A0A140LI48 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb8A0A140LI48 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb8A0A140LI48 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhgb8A0A140LI48 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Pcdhgb8A0A140LI48 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhgb8A0A140LI48 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.9■□□□□ 0.94
Pcdhgb8A0A140LI48 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb8A0A140LI48 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhgb8A0A140LI48 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb8A0A140LI48 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhgb8A0A140LI48 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb8A0A140LI48 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.88■□□□□ 0.93
Pcdhgb8A0A140LI48 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhgb8A0A140LI48 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb8A0A140LI48 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhgb8A0A140LI48 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhgb8A0A140LI48 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb8A0A140LI48 Gm6821-201ENSMUST00000107540 542 ntBASIC20.86■□□□□ 0.93
Pcdhgb8A0A140LI48 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb8A0A140LI48 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhgb8A0A140LI48 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb8A0A140LI48 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb8A0A140LI48 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhgb8A0A140LI48 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb8A0A140LI48 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.84■□□□□ 0.93
Pcdhgb8A0A140LI48 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhgb8A0A140LI48 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb8A0A140LI48 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhgb8A0A140LI48 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhgb8A0A140LI48 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Pcdhgb8A0A140LI48 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgb8A0A140LI48 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.83■□□□□ 0.93
Pcdhgb8A0A140LI48 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Pcdhgb8A0A140LI48 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhgb8A0A140LI48 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgb8A0A140LI48 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhgb8A0A140LI48 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhgb8A0A140LI48 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb8A0A140LI48 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb8A0A140LI48 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhgb8A0A140LI48 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Pcdhgb8A0A140LI48 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhgb8A0A140LI48 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb8A0A140LI48 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.79■□□□□ 0.92
Pcdhgb8A0A140LI48 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb8A0A140LI48 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pcdhgb8A0A140LI48 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb8A0A140LI48 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb8A0A140LI48 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhgb8A0A140LI48 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb8A0A140LI48 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb8A0A140LI48 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Pcdhgb8A0A140LI48 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.78■□□□□ 0.92
Pcdhgb8A0A140LI48 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pcdhgb8A0A140LI48 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgb8A0A140LI48 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgb8A0A140LI48 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pcdhgb8A0A140LI48 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms