Protein–RNA interactions for Protein: A0A0G2LB96

Trbv29, T cell receptor beta, variable 29 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv29A0A0G2LB96 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv29A0A0G2LB96 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv29A0A0G2LB96 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Trbv29A0A0G2LB96 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trbv29A0A0G2LB96 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.53■□□□□ 0.72
Trbv29A0A0G2LB96 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv29A0A0G2LB96 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trbv29A0A0G2LB96 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv29A0A0G2LB96 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv29A0A0G2LB96 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trbv29A0A0G2LB96 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv29A0A0G2LB96 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv29A0A0G2LB96 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv29A0A0G2LB96 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv29A0A0G2LB96 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.49■□□□□ 0.71
Trbv29A0A0G2LB96 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv29A0A0G2LB96 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv29A0A0G2LB96 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv29A0A0G2LB96 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv29A0A0G2LB96 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv29A0A0G2LB96 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv29A0A0G2LB96 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trbv29A0A0G2LB96 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv29A0A0G2LB96 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.44■□□□□ 0.7
Trbv29A0A0G2LB96 Zfp131-205ENSMUST00000223812 663 ntBASIC19.44■□□□□ 0.7
Trbv29A0A0G2LB96 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv29A0A0G2LB96 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv29A0A0G2LB96 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv29A0A0G2LB96 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv29A0A0G2LB96 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv29A0A0G2LB96 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Trbv29A0A0G2LB96 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv29A0A0G2LB96 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC19.39■□□□□ 0.69
Trbv29A0A0G2LB96 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC19.39■□□□□ 0.69
Trbv29A0A0G2LB96 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Trbv29A0A0G2LB96 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv29A0A0G2LB96 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv29A0A0G2LB96 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.38■□□□□ 0.69
Trbv29A0A0G2LB96 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv29A0A0G2LB96 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv29A0A0G2LB96 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv29A0A0G2LB96 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv29A0A0G2LB96 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv29A0A0G2LB96 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv29A0A0G2LB96 Gm24970-201ENSMUST00000175582 82 ntBASIC19.36■□□□□ 0.69
Trbv29A0A0G2LB96 Gm9397-201ENSMUST00000200125 605 ntBASIC19.35■□□□□ 0.69
Trbv29A0A0G2LB96 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.35■□□□□ 0.69
Trbv29A0A0G2LB96 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.35■□□□□ 0.69
Trbv29A0A0G2LB96 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv29A0A0G2LB96 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv29A0A0G2LB96 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv29A0A0G2LB96 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trbv29A0A0G2LB96 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv29A0A0G2LB96 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.33■□□□□ 0.68
Trbv29A0A0G2LB96 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Particl-201ENSMUST00000205370 1560 ntBASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv29A0A0G2LB96 Gm30023-201ENSMUST00000197970 889 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms