Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-2A0A0G2JF93 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav13n-2A0A0G2JF93 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav13n-2A0A0G2JF93 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav13n-2A0A0G2JF93 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav13n-2A0A0G2JF93 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-2A0A0G2JF93 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav13n-2A0A0G2JF93 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav13n-2A0A0G2JF93 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-2A0A0G2JF93 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav13n-2A0A0G2JF93 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
Trav13n-2A0A0G2JF93 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav13n-2A0A0G2JF93 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.45■□□□□ 0.06
Trav13n-2A0A0G2JF93 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-2A0A0G2JF93 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav13n-2A0A0G2JF93 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav13n-2A0A0G2JF93 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-2A0A0G2JF93 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav13n-2A0A0G2JF93 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-2A0A0G2JF93 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav13n-2A0A0G2JF93 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-2A0A0G2JF93 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav13n-2A0A0G2JF93 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav13n-2A0A0G2JF93 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trav13n-2A0A0G2JF93 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-2A0A0G2JF93 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav13n-2A0A0G2JF93 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-2A0A0G2JF93 Gm27322-201ENSMUST00000184007 104 ntBASIC15.4■□□□□ 0.06
Trav13n-2A0A0G2JF93 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.4■□□□□ 0.06
Trav13n-2A0A0G2JF93 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav13n-2A0A0G2JF93 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav13n-2A0A0G2JF93 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-2A0A0G2JF93 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Trav13n-2A0A0G2JF93 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-2A0A0G2JF93 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-2A0A0G2JF93 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav13n-2A0A0G2JF93 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-2A0A0G2JF93 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-2A0A0G2JF93 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-2A0A0G2JF93 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav13n-2A0A0G2JF93 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav13n-2A0A0G2JF93 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav13n-2A0A0G2JF93 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-2A0A0G2JF93 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-2A0A0G2JF93 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav13n-2A0A0G2JF93 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trav13n-2A0A0G2JF93 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav13n-2A0A0G2JF93 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav13n-2A0A0G2JF93 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-2A0A0G2JF93 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-2A0A0G2JF93 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Trav13n-2A0A0G2JF93 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.35■□□□□ 0.05
Trav13n-2A0A0G2JF93 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-2A0A0G2JF93 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav13n-2A0A0G2JF93 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-2A0A0G2JF93 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-2A0A0G2JF93 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav13n-2A0A0G2JF93 Gm17641-201ENSMUST00000166328 2350 ntBASIC15.33■□□□□ 0.04
Trav13n-2A0A0G2JF93 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav13n-2A0A0G2JF93 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav13n-2A0A0G2JF93 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-2A0A0G2JF93 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-2A0A0G2JF93 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav13n-2A0A0G2JF93 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav13n-2A0A0G2JF93 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-2A0A0G2JF93 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-2A0A0G2JF93 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav13n-2A0A0G2JF93 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-2A0A0G2JF93 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav13n-2A0A0G2JF93 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms