Protein–RNA interactions for Protein: A0A087WR36

Vmn1r90, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r90A0A087WR36 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Vmn1r90A0A087WR36 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Vmn1r90A0A087WR36 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
Vmn1r90A0A087WR36 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Vmn1r90A0A087WR36 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Vmn1r90A0A087WR36 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Vmn1r90A0A087WR36 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r90A0A087WR36 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r90A0A087WR36 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r90A0A087WR36 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
Vmn1r90A0A087WR36 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r90A0A087WR36 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Vmn1r90A0A087WR36 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r90A0A087WR36 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r90A0A087WR36 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
Vmn1r90A0A087WR36 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r90A0A087WR36 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r90A0A087WR36 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
Vmn1r90A0A087WR36 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.39■■□□□ 1.17
Vmn1r90A0A087WR36 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
Vmn1r90A0A087WR36 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r90A0A087WR36 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Vmn1r90A0A087WR36 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r90A0A087WR36 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
Vmn1r90A0A087WR36 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vmn1r90A0A087WR36 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vmn1r90A0A087WR36 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.35■■□□□ 1.17
Vmn1r90A0A087WR36 Particl-201ENSMUST00000205370 1560 ntBASIC22.35■■□□□ 1.17
Vmn1r90A0A087WR36 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Vmn1r90A0A087WR36 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r90A0A087WR36 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r90A0A087WR36 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r90A0A087WR36 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.33■■□□□ 1.17
Vmn1r90A0A087WR36 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC22.32■■□□□ 1.16
Vmn1r90A0A087WR36 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r90A0A087WR36 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r90A0A087WR36 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r90A0A087WR36 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r90A0A087WR36 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.31■■□□□ 1.16
Vmn1r90A0A087WR36 Gm7432-201ENSMUST00000210343 879 ntBASIC22.31■■□□□ 1.16
Vmn1r90A0A087WR36 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r90A0A087WR36 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r90A0A087WR36 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r90A0A087WR36 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.3■■□□□ 1.16
Vmn1r90A0A087WR36 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r90A0A087WR36 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Vmn1r90A0A087WR36 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Vmn1r90A0A087WR36 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Vmn1r90A0A087WR36 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r90A0A087WR36 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r90A0A087WR36 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r90A0A087WR36 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r90A0A087WR36 AC131739.1-201ENSMUST00000221692 1245 ntBASIC22.26■■□□□ 1.15
Vmn1r90A0A087WR36 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r90A0A087WR36 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC22.25■■□□□ 1.15
Vmn1r90A0A087WR36 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r90A0A087WR36 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Vmn1r90A0A087WR36 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Vmn1r90A0A087WR36 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r90A0A087WR36 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r90A0A087WR36 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.24■■□□□ 1.15
Vmn1r90A0A087WR36 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.24■■□□□ 1.15
Vmn1r90A0A087WR36 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC22.24■■□□□ 1.15
Vmn1r90A0A087WR36 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r90A0A087WR36 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.23■■□□□ 1.15
Vmn1r90A0A087WR36 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.23■■□□□ 1.15
Vmn1r90A0A087WR36 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r90A0A087WR36 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r90A0A087WR36 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r90A0A087WR36 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r90A0A087WR36 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r90A0A087WR36 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r90A0A087WR36 Gm11599-201ENSMUST00000118720 878 ntBASIC22.21■■□□□ 1.15
Vmn1r90A0A087WR36 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r90A0A087WR36 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r90A0A087WR36 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r90A0A087WR36 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r90A0A087WR36 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Vmn1r90A0A087WR36 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.2■■□□□ 1.14
Vmn1r90A0A087WR36 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r90A0A087WR36 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r90A0A087WR36 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r90A0A087WR36 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r90A0A087WR36 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r90A0A087WR36 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r90A0A087WR36 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r90A0A087WR36 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r90A0A087WR36 Gm37136-201ENSMUST00000194368 194 ntBASIC22.17■■□□□ 1.14
Vmn1r90A0A087WR36 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Vmn1r90A0A087WR36 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Vmn1r90A0A087WR36 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r90A0A087WR36 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Vmn1r90A0A087WR36 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Vmn1r90A0A087WR36 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r90A0A087WR36 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Vmn1r90A0A087WR36 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Vmn1r90A0A087WR36 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r90A0A087WR36 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.13■■□□□ 1.13
Vmn1r90A0A087WR36 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r90A0A087WR36 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms