Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Trav12-3A0A075B648 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-3A0A075B648 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-3A0A075B648 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trav12-3A0A075B648 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.29■□□□□ 0.36
Trav12-3A0A075B648 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trav12-3A0A075B648 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-3A0A075B648 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-3A0A075B648 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Trav12-3A0A075B648 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-3A0A075B648 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-3A0A075B648 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-3A0A075B648 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trav12-3A0A075B648 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trav12-3A0A075B648 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Trav12-3A0A075B648 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Trav12-3A0A075B648 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trav12-3A0A075B648 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trav12-3A0A075B648 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-3A0A075B648 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC17.26■□□□□ 0.35
Trav12-3A0A075B648 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-3A0A075B648 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-3A0A075B648 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav12-3A0A075B648 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC17.25■□□□□ 0.35
Trav12-3A0A075B648 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-3A0A075B648 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trav12-3A0A075B648 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Trav12-3A0A075B648 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-3A0A075B648 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-3A0A075B648 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.25■□□□□ 0.35
Trav12-3A0A075B648 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav12-3A0A075B648 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav12-3A0A075B648 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trav12-3A0A075B648 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-3A0A075B648 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-3A0A075B648 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.23■□□□□ 0.35
Trav12-3A0A075B648 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav12-3A0A075B648 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Trav12-3A0A075B648 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Trav12-3A0A075B648 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav12-3A0A075B648 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-3A0A075B648 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-3A0A075B648 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-3A0A075B648 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav12-3A0A075B648 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-3A0A075B648 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Trav12-3A0A075B648 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-3A0A075B648 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-3A0A075B648 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-3A0A075B648 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Trav12-3A0A075B648 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav12-3A0A075B648 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-3A0A075B648 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Trav12-3A0A075B648 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.19■□□□□ 0.34
Trav12-3A0A075B648 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav12-3A0A075B648 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-3A0A075B648 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav12-3A0A075B648 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-3A0A075B648 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav12-3A0A075B648 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-3A0A075B648 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-3A0A075B648 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-3A0A075B648 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-3A0A075B648 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav12-3A0A075B648 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12-3A0A075B648 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav12-3A0A075B648 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12-3A0A075B648 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-3A0A075B648 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-3A0A075B648 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-3A0A075B648 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-3A0A075B648 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-3A0A075B648 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12-3A0A075B648 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trav12-3A0A075B648 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Trav12-3A0A075B648 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12-3A0A075B648 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trav12-3A0A075B648 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-3A0A075B648 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.13■□□□□ 0.33
Trav12-3A0A075B648 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-3A0A075B648 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Trav12-3A0A075B648 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-3A0A075B648 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-3A0A075B648 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-3A0A075B648 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12-3A0A075B648 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-3A0A075B648 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-3A0A075B648 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-3A0A075B648 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-3A0A075B648 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12-3A0A075B648 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-3A0A075B648 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-3A0A075B648 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-3A0A075B648 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-3A0A075B648 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12-3A0A075B648 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-3A0A075B648 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.1■□□□□ 0.33
Trav12-3A0A075B648 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Trav12-3A0A075B648 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12-3A0A075B648 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms