Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.88■□□□□ 0.93
Trav6-7-dv9A0A075B639 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav6-7-dv9A0A075B639 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trav6-7-dv9A0A075B639 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav6-7-dv9A0A075B639 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Trav6-7-dv9A0A075B639 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav6-7-dv9A0A075B639 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav6-7-dv9A0A075B639 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav6-7-dv9A0A075B639 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav6-7-dv9A0A075B639 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Trav6-7-dv9A0A075B639 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Trav6-7-dv9A0A075B639 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6-7-dv9A0A075B639 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trav6-7-dv9A0A075B639 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6-7-dv9A0A075B639 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Trav6-7-dv9A0A075B639 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav6-7-dv9A0A075B639 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav6-7-dv9A0A075B639 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav6-7-dv9A0A075B639 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav6-7-dv9A0A075B639 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.83■□□□□ 0.93
Trav6-7-dv9A0A075B639 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Trav6-7-dv9A0A075B639 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trav6-7-dv9A0A075B639 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.83■□□□□ 0.92
Trav6-7-dv9A0A075B639 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Trav6-7-dv9A0A075B639 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav6-7-dv9A0A075B639 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav6-7-dv9A0A075B639 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav6-7-dv9A0A075B639 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav6-7-dv9A0A075B639 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trav6-7-dv9A0A075B639 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
Trav6-7-dv9A0A075B639 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.8■□□□□ 0.92
Trav6-7-dv9A0A075B639 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav6-7-dv9A0A075B639 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav6-7-dv9A0A075B639 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trav6-7-dv9A0A075B639 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav6-7-dv9A0A075B639 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav6-7-dv9A0A075B639 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav6-7-dv9A0A075B639 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6-7-dv9A0A075B639 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6-7-dv9A0A075B639 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav6-7-dv9A0A075B639 Particl-201ENSMUST00000205370 1560 ntBASIC20.77■□□□□ 0.92
Trav6-7-dv9A0A075B639 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav6-7-dv9A0A075B639 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Trav6-7-dv9A0A075B639 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Trav6-7-dv9A0A075B639 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6-7-dv9A0A075B639 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.76■□□□□ 0.91
Trav6-7-dv9A0A075B639 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.76■□□□□ 0.91
Trav6-7-dv9A0A075B639 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Trav6-7-dv9A0A075B639 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6-7-dv9A0A075B639 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav6-7-dv9A0A075B639 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trav6-7-dv9A0A075B639 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6-7-dv9A0A075B639 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6-7-dv9A0A075B639 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav6-7-dv9A0A075B639 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
Trav6-7-dv9A0A075B639 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.74■□□□□ 0.91
Trav6-7-dv9A0A075B639 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav6-7-dv9A0A075B639 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav6-7-dv9A0A075B639 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Trav6-7-dv9A0A075B639 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav6-7-dv9A0A075B639 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Trav6-7-dv9A0A075B639 Nkain2-201ENSMUST00000092602 558 ntBASIC20.71■□□□□ 0.91
Trav6-7-dv9A0A075B639 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Trav6-7-dv9A0A075B639 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav6-7-dv9A0A075B639 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
Trav6-7-dv9A0A075B639 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Trav6-7-dv9A0A075B639 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav6-7-dv9A0A075B639 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav6-7-dv9A0A075B639 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav6-7-dv9A0A075B639 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Trav6-7-dv9A0A075B639 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6-7-dv9A0A075B639 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6-7-dv9A0A075B639 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6-7-dv9A0A075B639 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.68■□□□□ 0.9
Trav6-7-dv9A0A075B639 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.68■□□□□ 0.9
Trav6-7-dv9A0A075B639 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.68■□□□□ 0.9
Trav6-7-dv9A0A075B639 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6-7-dv9A0A075B639 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trav6-7-dv9A0A075B639 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav6-7-dv9A0A075B639 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav6-7-dv9A0A075B639 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav6-7-dv9A0A075B639 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Trav6-7-dv9A0A075B639 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav6-7-dv9A0A075B639 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Trav6-7-dv9A0A075B639 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.64■□□□□ 0.89
Trav6-7-dv9A0A075B639 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav6-7-dv9A0A075B639 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav6-7-dv9A0A075B639 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.62■□□□□ 0.89
Trav6-7-dv9A0A075B639 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav6-7-dv9A0A075B639 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Trav6-7-dv9A0A075B639 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav6-7-dv9A0A075B639 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Trav6-7-dv9A0A075B639 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav6-7-dv9A0A075B639 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.61■□□□□ 0.89
Trav6-7-dv9A0A075B639 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.61■□□□□ 0.89
Trav6-7-dv9A0A075B639 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav6-7-dv9A0A075B639 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Trav6-7-dv9A0A075B639 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav6-7-dv9A0A075B639 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav6-7-dv9A0A075B639 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms