Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 FAM27B-201ENST00000610601 213 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 SAMMSON-226ENST00000642089 1582 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 MIPEPP2-201ENST00000422560 1819 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 CR788268.1-201ENST00000603931 1809 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 ZFRP1-201ENST00000457579 2970 ntBASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
VPS29Q9UBQ0 INTS6P1-201ENST00000504674 2530 ntBASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 RN7SKP269-201ENST00000365545 319 ntBASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 GLUD1P9-201ENST00000420997 1173 ntBASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AL591623.2-201ENST00000449978 222 ntBASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 BTF3P13-201ENST00000513224 490 ntBASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 COX6CP4-201ENST00000605798 228 ntBASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC234782.5-201ENST00000617723 324 ntBASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VPS29Q9UBQ0 CASC19-255ENST00000641733 1385 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AC093909.5-201ENST00000621839 1799 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AC007382.1-201ENST00000624376 2618 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 OR56B2P-201ENST00000317102 954 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 MIR1178-201ENST00000408396 91 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 OR13Z1P-201ENST00000416141 834 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 OR2AM1P-201ENST00000422137 422 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 BX510359.3-201ENST00000422168 306 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 OR2AF1P-201ENST00000454899 889 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 RPL7AP6-201ENST00000477943 801 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AC005520.3-201ENST00000602874 370 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AC130352.1-201ENST00000602979 661 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 AL359757.1-201ENST00000623176 255 ntBASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VPS29Q9UBQ0 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 RN7SKP104-201ENST00000362605 328 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 MIR137-201ENST00000385223 102 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 RNU1-82P-201ENST00000390851 165 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC007559.1-201ENST00000428736 355 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 OR52J1P-201ENST00000450596 932 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC010733.1-201ENST00000451515 401 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 AC025164.1-201ENST00000496249 478 ntBASIC4.52□□□□□ -1.69
VPS29Q9UBQ0 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms