Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNORD95-201ENST00000579879 68 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AL592494.3-201ENST00000609485 464 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC004232.3-201ENST00000622977 525 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 AC104260.2-201ENST00000623551 3497 ntBASIC5.71□□□□□ -1.5
DKK3Q9UBP4 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.71□□□□□ -1.5
DKK3Q9UBP4 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 MTND5P11-201ENST00000511037 1812 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 RNU6-906P-201ENST00000384700 70 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 SNORD65-201ENST00000391079 73 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 TNPO1P1-201ENST00000423641 1138 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 CR769776.1-201ENST00000441254 787 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 SETD6P1-201ENST00000444575 317 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AL163193.1-201ENST00000444895 788 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC092691.2-201ENST00000461787 803 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 RPS26P39-201ENST00000469206 341 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC004263.1-201ENST00000479327 332 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 MTCO3P35-201ENST00000485582 781 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 RPS7P6-201ENST00000485777 579 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 DUTP1-201ENST00000493631 470 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 RN7SL466P-201ENST00000497546 295 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 OR10V3P-201ENST00000525712 725 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AL359219.2-201ENST00000555184 348 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 NPM1P42-201ENST00000560329 862 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC009097.3-201ENST00000563557 1018 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AL390726.5-202ENST00000564800 256 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC106734.1-201ENST00000568646 663 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC008088.1-201ENST00000580993 280 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AL589674.2-201ENST00000604304 337 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 HIRAP1-201ENST00000605318 787 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AL035661.1-201ENST00000620459 1144 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 MIR6719-201ENST00000622428 87 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC079416.3-201ENST00000624479 549 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC114786.1-201ENST00000512892 1415 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AL158152.1-201ENST00000602652 1435 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
DKK3Q9UBP4 MAPK10-328ENST00000641553 4009 ntBASIC5.7□□□□□ -1.5
DKK3Q9UBP4 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 AC093775.1-201ENST00000624154 1868 ntBASIC5.69□□□□□ -1.5
DKK3Q9UBP4 RLIMP2-201ENST00000427891 1563 ntBASIC5.69□□□□□ -1.5
DKK3Q9UBP4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.69□□□□□ -1.5
DKK3Q9UBP4 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms