Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 GSTP1P1-201ENST00000548078 319 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC009117.1-201ENST00000563948 554 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AL031320.1-201ENST00000604177 357 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AL162431.4-201ENST00000604674 411 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 GMCL1P2-201ENST00000605230 823 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AP005131.7-201ENST00000610087 611 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC015922.4-201ENST00000612568 690 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC021106.3-201ENST00000623925 531 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 AC132825.1-201ENST00000463573 2247 ntBASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TM9SF3Q9HD45 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC010132.2-201ENST00000295493 1043 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 RNVU1-6-201ENST00000364688 164 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC007618.1-201ENST00000366455 732 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 MIR141-201ENST00000384975 95 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 RN7SKP97-201ENST00000410966 333 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC245028.1-201ENST00000423259 256 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 MTND2P2-201ENST00000434633 945 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 ELOCP3-201ENST00000439303 348 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 PTMAP3-201ENST00000447474 330 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 TPT1P13-201ENST00000449760 499 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC021660.1-201ENST00000465006 554 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 RN7SL205P-201ENST00000490174 284 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 RN7SL244P-201ENST00000493405 297 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 CEACAMP10-202ENST00000495431 496 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 MYL12BP2-201ENST00000503948 512 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 COX6B1P5-201ENST00000509843 249 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC006427.1-201ENST00000514359 712 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 SNORD116-30-201ENST00000516468 85 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 HNRNPRP2-201ENST00000528421 743 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC079075.1-201ENST00000559543 878 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 RN7SL52P-201ENST00000584271 284 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 PRPF19P1-201ENST00000584766 898 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AP005212.4-201ENST00000614206 710 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 RN7SL722P-201ENST00000617780 284 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 RN7SL565P-201ENST00000618246 284 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC015722.2-201ENST00000622210 551 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 MIR6810-201ENST00000622701 70 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC010435.1-201ENST00000623353 1177 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 AC022417.1-201ENST00000624768 1303 ntBASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TM9SF3Q9HD45 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 RNA5SP428-201ENST00000365129 132 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 MIR192-201ENST00000384915 110 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AC013442.1-201ENST00000397347 228 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 RPL21P67-201ENST00000402896 478 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AC016397.1-201ENST00000412463 242 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 MTND6P18-201ENST00000439477 513 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 MTCO3P17-201ENST00000443775 513 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 CASP3P1-201ENST00000446037 609 ntBASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.1□□□□□ -1.59
TM9SF3Q9HD45 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms