Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 SNORA70H-201ENST00000383910 135 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 SNORA70J-201ENST00000384182 135 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 MIR621-201ENST00000384919 96 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 MTND1P20-201ENST00000430341 950 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC069154.1-201ENST00000432914 542 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AL353662.1-201ENST00000439099 327 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AL606662.1-201ENST00000445763 553 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AL034418.1-201ENST00000448675 860 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 FAR2P1-206ENST00000449736 709 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC073594.1-201ENST00000462065 364 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 MTND1P16-201ENST00000465177 898 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 RPL23AP12-201ENST00000467573 473 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 RN7SL165P-201ENST00000477476 291 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC108471.1-201ENST00000513977 287 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 RN7SKP35-201ENST00000517210 151 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC020937.1-201ENST00000519677 1013 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC092709.1-201ENST00000521355 1045 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 BCAS2P1-201ENST00000528022 632 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 TOMM20P1-201ENST00000534518 427 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC004825.1-201ENST00000555068 586 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 CLPTM1LP1-201ENST00000604519 484 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC141002.1-201ENST00000607025 279 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC018926.3-201ENST00000618841 406 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AL512652.1-201ENST00000619006 500 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AL137067.2-201ENST00000621202 131 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC015726.3-201ENST00000624501 418 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC003992.1-201ENST00000635364 557 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 AC006511.3-201ENST00000624929 1783 ntBASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
TRIM39Q9HCM9 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AC140479.2-201ENST00000421567 3130 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 COX6B1P3-201ENST00000312310 260 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 Y_RNA.51-201ENST00000362725 102 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 SNORA51.9-201ENST00000384295 124 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AP003170.5-201ENST00000397185 335 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 RPS7P8-201ENST00000418311 581 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AC007568.1-201ENST00000422912 471 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AL022400.1-201ENST00000423946 935 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AL590399.4-201ENST00000436561 601 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AC023141.3-201ENST00000436698 278 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AL031663.1-201ENST00000437445 219 ntBASIC6.07□□□□□ -1.44
TRIM39Q9HCM9 AMYP1-201ENST00000440059 1023 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms