Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
CHD8Q9HCK8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AC079298.1-201ENST00000625026 1619 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AC005034.3-201ENST00000604845 1747 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 RNU1-83P-201ENST00000363426 164 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 OR51B3P-201ENST00000412287 913 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AC000111.2-201ENST00000448200 210 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AL451086.1-201ENST00000605596 223 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 MIR6875-201ENST00000617506 72 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 SALL4P2-201ENST00000423288 2910 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AL022311.1-201ENST00000623726 19416 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 TCEA1P4-201ENST00000415066 844 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 RN7SKP157-201ENST00000516174 282 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 MIR4286-201ENST00000580651 93 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 MIR7111-201ENST00000619751 72 ntBASIC4.48□□□□□ -1.69
CHD8Q9HCK8 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
CHD8Q9HCK8 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC079097.1-201ENST00000512187 1399 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 ZNF840P-201ENST00000504759 1996 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 OR8G2P-201ENST00000412796 908 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 GAPDHP62-201ENST00000515313 990 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC100847.1-201ENST00000611316 481 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AL121772.2-201ENST00000614331 297 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 UGT2B24P-201ENST00000514441 1597 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AL929601.4-201ENST00000613011 1341 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 MAPK10-323ENST00000641493 3207 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 IL13RA2-202ENST00000371936 1498 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 OR56B2P-202ENST00000641377 2453 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 VN1R105P-201ENST00000486595 910 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC146944.2-203ENST00000502493 354 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC097173.1-201ENST00000505862 819 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC139495.1-202ENST00000513164 354 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 FTH1P9-201ENST00000513251 355 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC097486.1-201ENST00000515331 210 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 RN7SKP289-201ENST00000517244 295 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AP003730.1-201ENST00000524605 285 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AC112230.1-201ENST00000604342 547 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 AP002360.3-201ENST00000607673 710 ntBASIC4.47□□□□□ -1.69
CHD8Q9HCK8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
CHD8Q9HCK8 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHD8Q9HCK8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CHD8Q9HCK8 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
CHD8Q9HCK8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
CHD8Q9HCK8 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
CHD8Q9HCK8 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC4.46□□□□□ -1.69
CHD8Q9HCK8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.46□□□□□ -1.7
CHD8Q9HCK8 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms