Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL078599.1-201ENST00000402075 293 ntBASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC243772.1-201ENST00000451620 410 ntBASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC090114.3-201ENST00000479267 829 ntBASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 CYCSP40-201ENST00000575927 294 ntBASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 MTCO1P11-201ENST00000429111 1528 ntBASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.01□□□□□ -1.61
LRRC40Q9H9A6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 ZNF652P1-201ENST00000442420 1309 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 RPL23P2-201ENST00000320371 421 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 UBBP2-201ENST00000376781 231 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 SNORA68.2-201ENST00000391263 128 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 AL021331.1-201ENST00000402817 582 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 RN7SKP97-201ENST00000410966 333 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 AL355433.1-201ENST00000422804 300 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 RPL23AP4-201ENST00000427757 463 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 MTND2P2-201ENST00000434633 945 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 AL137845.2-201ENST00000444292 988 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 RNA5SP103-201ENST00000459503 118 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 CREM-220ENST00000463314 964 ntTSL 2 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 RN7SL809P-201ENST00000482040 297 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 RN7SL591P-201ENST00000496150 292 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 AC090022.1-201ENST00000546569 311 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 AC007620.3-201ENST00000608131 497 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 AC093799.2-201ENST00000610062 578 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 CGA-206ENST00000630630 832 ntTSL 2 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 LINC01739-205ENST00000641890 573 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LRRC40Q9H9A6 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5□□□□□ -1.61
LRRC40Q9H9A6 AL121950.1-201ENST00000624993 2077 ntBASIC5□□□□□ -1.61
LRRC40Q9H9A6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 DDX18P5-201ENST00000534547 1306 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AC021242.1-201ENST00000507315 2035 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 RNA5SP428-201ENST00000365129 132 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 BMS1P3-201ENST00000372011 932 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 OR13Z1P-201ENST00000416141 834 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AF186996.5-201ENST00000418098 904 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 MTCYBP7-201ENST00000419540 1134 ntBASIC4.99□□□□□ -1.61
LRRC40Q9H9A6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms