Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC7.73□□□□□ -1.17
IFT140Q96RY7 AC091959.2-201ENST00000477363 321 ntBASIC7.73□□□□□ -1.17
IFT140Q96RY7 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC7.73□□□□□ -1.17
IFT140Q96RY7 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.73□□□□□ -1.17
IFT140Q96RY7 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
IFT140Q96RY7 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
IFT140Q96RY7 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
IFT140Q96RY7 AL079305.1-201ENST00000623159 3008 ntBASIC7.73□□□□□ -1.17
IFT140Q96RY7 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.73□□□□□ -1.17
IFT140Q96RY7 LARP1BP1-201ENST00000506036 1359 ntBASIC7.73□□□□□ -1.17
IFT140Q96RY7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
IFT140Q96RY7 ARFGEF3-201ENST00000251691 14877 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
IFT140Q96RY7 AC107980.1-201ENST00000558671 3355 ntBASIC7.73□□□□□ -1.17
IFT140Q96RY7 AP000547.3-204ENST00000588548 2523 ntBASIC7.73□□□□□ -1.17
IFT140Q96RY7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
IFT140Q96RY7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
IFT140Q96RY7 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
IFT140Q96RY7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
IFT140Q96RY7 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
IFT140Q96RY7 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
IFT140Q96RY7 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
IFT140Q96RY7 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
IFT140Q96RY7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 SNORA63.1-201ENST00000362493 131 ntBASIC7.72□□□□□ -1.17
IFT140Q96RY7 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 AL451139.1-201ENST00000434718 346 ntBASIC7.72□□□□□ -1.17
IFT140Q96RY7 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 OR5D2P-201ENST00000524390 911 ntBASIC7.72□□□□□ -1.17
IFT140Q96RY7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 HNRNPCP4-201ENST00000571636 900 ntBASIC7.72□□□□□ -1.17
IFT140Q96RY7 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 AC135352.1-201ENST00000506173 1418 ntBASIC7.72□□□□□ -1.17
IFT140Q96RY7 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 Z95114.1-201ENST00000624264 14574 ntBASIC7.72□□□□□ -1.17
IFT140Q96RY7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC7.72□□□□□ -1.17
IFT140Q96RY7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
IFT140Q96RY7 AL360270.2-201ENST00000562952 5985 ntBASIC7.72□□□□□ -1.17
IFT140Q96RY7 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
IFT140Q96RY7 ICE2P1-201ENST00000512800 1849 ntBASIC7.71□□□□□ -1.17
IFT140Q96RY7 AL033543.1-201ENST00000623440 13454 ntBASIC7.71□□□□□ -1.18
IFT140Q96RY7 5S_rRNA.1-201ENST00000364415 116 ntBASIC7.71□□□□□ -1.18
IFT140Q96RY7 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC7.71□□□□□ -1.18
IFT140Q96RY7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC7.71□□□□□ -1.18
IFT140Q96RY7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC092709.1-201ENST00000521355 1045 ntBASIC7.71□□□□□ -1.18
IFT140Q96RY7 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
IFT140Q96RY7 MIR4286-201ENST00000580651 93 ntBASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AL139254.3-201ENST00000641097 674 ntBASIC7.71□□□□□ -1.18
IFT140Q96RY7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
IFT140Q96RY7 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
IFT140Q96RY7 AC005831.1-201ENST00000624384 1697 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
IFT140Q96RY7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 SNORA70.6-201ENST00000383934 134 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 Z98745.1-201ENST00000402553 494 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC7.7□□□□□ -1.18
IFT140Q96RY7 AC008280.1-201ENST00000418851 412 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 E2F6P2-201ENST00000420708 748 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 SCP2-206ENST00000430330 938 ntTSL 2 BASIC7.7□□□□□ -1.18
IFT140Q96RY7 AL117339.2-201ENST00000430475 180 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 BTF3P10-201ENST00000433415 495 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC7.7□□□□□ -1.18
IFT140Q96RY7 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC7.7□□□□□ -1.18
IFT140Q96RY7 AC023271.1-201ENST00000445936 1090 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 DHFRP3-201ENST00000455595 559 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 AC090142.1-201ENST00000465776 462 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 AC053481.1-201ENST00000467217 306 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 TPT1P3-201ENST00000492841 512 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.7□□□□□ -1.18
IFT140Q96RY7 MIR3944-201ENST00000581277 108 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 AC008739.3-201ENST00000603262 127 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 MIR8059-201ENST00000620427 81 ntBASIC7.7□□□□□ -1.18
IFT140Q96RY7 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC7.7□□□□□ -1.18
IFT140Q96RY7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC7.7□□□□□ -1.18
IFT140Q96RY7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
IFT140Q96RY7 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
IFT140Q96RY7 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
IFT140Q96RY7 MGP-201ENST00000228938 694 ntTSL 3 BASIC7.69□□□□□ -1.18
IFT140Q96RY7 Y_RNA.333-201ENST00000365274 102 ntBASIC7.69□□□□□ -1.18
IFT140Q96RY7 AL161909.1-201ENST00000397390 712 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms