Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC008126.1-201ENST00000549019 480 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.36□□□□□ -1.39
ERCC4Q92889 CYCSP38-201ENST00000559840 322 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AGGF1P7-201ENST00000562369 913 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 MTND4LP24-201ENST00000572277 291 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.36□□□□□ -1.39
ERCC4Q92889 AC079315.1-201ENST00000602952 623 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AL109653.1-201ENST00000603091 248 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AP001437.1-201ENST00000608783 456 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AL392048.1-201ENST00000613946 534 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 Six3os1_2.1-201ENST00000616963 217 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC6.36□□□□□ -1.39
ERCC4Q92889 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
ERCC4Q92889 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
ERCC4Q92889 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
ERCC4Q92889 AC007342.7-201ENST00000624610 2337 ntBASIC6.36□□□□□ -1.39
ERCC4Q92889 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC4Q92889 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC4Q92889 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC4Q92889 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC4Q92889 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC017079.1-201ENST00000333650 415 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC4Q92889 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ERCC4Q92889 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC4Q92889 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC4Q92889 Y_RNA.472-201ENST00000384322 102 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 SNORD116-12-201ENST00000384468 92 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 U3.28-201ENST00000391249 210 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 RPS6P23-201ENST00000413224 722 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC4Q92889 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC4Q92889 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 MTCO3P5-201ENST00000433620 714 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.35□□□□□ -1.39
ERCC4Q92889 PCBP2P1-201ENST00000437262 977 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC4Q92889 VN1R110P-201ENST00000438988 971 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AMYP1-201ENST00000440059 1023 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 PPIAP27-201ENST00000453800 265 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC099521.1-201ENST00000482557 334 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 OR5H7P-201ENST00000514084 930 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 SNORA3.4-201ENST00000515969 96 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 Y_RNA.667-201ENST00000516212 107 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC104417.1-201ENST00000523974 751 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC087373.1-201ENST00000524920 491 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC4Q92889 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.35□□□□□ -1.39
ERCC4Q92889 NDUFA5P11-201ENST00000567995 343 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 AP005136.1-201ENST00000579765 429 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC069366.1-201ENST00000583159 838 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC4Q92889 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC4Q92889 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC011939.3-201ENST00000613686 466 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC007786.3-201ENST00000615154 596 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AL122125.1-201ENST00000616999 600 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC245014.3-201ENST00000618589 347 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.35□□□□□ -1.39
ERCC4Q92889 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC4Q92889 AC025262.3-201ENST00000623666 360 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 AC092159.4-201ENST00000624944 550 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ERCC4Q92889 AP001029.2-203ENST00000589795 4910 ntBASIC6.35□□□□□ -1.39
ERCC4Q92889 NXF4-202ENST00000416098 1465 ntBASIC6.34□□□□□ -1.39
ERCC4Q92889 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ERCC4Q92889 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
ERCC4Q92889 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
ERCC4Q92889 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.34□□□□□ -1.39
ERCC4Q92889 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.34□□□□□ -1.39
ERCC4Q92889 PDZK1P1-202ENST00000425209 1350 ntBASIC6.34□□□□□ -1.39
ERCC4Q92889 AC017007.4-201ENST00000503353 1352 ntBASIC6.34□□□□□ -1.39
ERCC4Q92889 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ERCC4Q92889 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ERCC4Q92889 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ERCC4Q92889 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.34□□□□□ -1.39
ERCC4Q92889 MTND5P23-201ENST00000430812 1655 ntBASIC6.34□□□□□ -1.39
ERCC4Q92889 MGP-201ENST00000228938 694 ntTSL 3 BASIC6.34□□□□□ -1.39
ERCC4Q92889 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms