Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
HERC6Q8IVU3 AC114774.1-201ENST00000507410 1770 ntBASIC5.78□□□□□ -1.48
HERC6Q8IVU3 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 MTND5P11-201ENST00000511037 1812 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 MIR600-201ENST00000385007 98 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 RNA5SP498-201ENST00000411342 120 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 UBE2V1P11-201ENST00000411559 285 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 OR2AM1P-201ENST00000422137 422 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 C4BPAP2-201ENST00000428434 478 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AL512637.2-201ENST00000431287 1256 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 RNFT1P2-201ENST00000443064 757 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 NDUFA5P9-201ENST00000472609 340 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 CDH12P2-201ENST00000504393 298 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 SNORA70.11-201ENST00000515987 138 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 SNORA70.13-201ENST00000516116 138 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 RNU6-334P-201ENST00000517072 102 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 BUD31P1-201ENST00000521828 359 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AP003102.1-201ENST00000525638 661 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC068339.2-201ENST00000534395 618 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC137627.1-201ENST00000545761 289 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC016839.1-201ENST00000578162 867 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC005034.4-201ENST00000603612 899 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AL049844.2-201ENST00000604280 628 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC112503.2-201ENST00000609005 552 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AL161616.1-201ENST00000611867 286 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 MIR8084-201ENST00000614105 89 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC145207.9-201ENST00000623802 325 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 AC119674.1-212ENST00000641155 993 ntBASIC5.77□□□□□ -1.49
HERC6Q8IVU3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HERC6Q8IVU3 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC068870.1-201ENST00000563737 2455 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC004158.1-201ENST00000564508 4319 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 RNU1-32P-201ENST00000363937 159 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 PEX12P1-201ENST00000400284 1048 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 COX6CP17-201ENST00000421389 185 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 HSFY7P-201ENST00000432672 318 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 HSFY8P-201ENST00000437934 318 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 RPS27P5-201ENST00000444247 244 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 RPL7P55-201ENST00000450522 746 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC104634.1-201ENST00000452720 462 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 HSFY5P-201ENST00000453726 309 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 NDUFAF4P3-201ENST00000456468 525 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 SETP6-201ENST00000479329 568 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AC109464.1-201ENST00000511091 819 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 RNU6-1308P-201ENST00000516817 103 ntBASIC5.76□□□□□ -1.49
HERC6Q8IVU3 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.76□□□□□ -1.49
HERC6Q8IVU3 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms