Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 RPS26P4-201ENST00000431743 355 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AL049745.1-201ENST00000433953 286 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 RPL35AP21-201ENST00000437667 333 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AC006466.1-201ENST00000438721 289 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 OR52J1P-201ENST00000450596 932 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 RPL23AP56-201ENST00000460778 453 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AC063943.1-201ENST00000465434 453 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AC092324.1-201ENST00000468671 324 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 OR7H2P-201ENST00000513483 306 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 HNRNPRP2-201ENST00000528421 743 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 EIF4A2P5-201ENST00000529914 499 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 EDDM3DP-201ENST00000554692 434 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AC234775.3-201ENST00000564612 656 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AC020910.3-201ENST00000603701 874 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AC018695.5-201ENST00000605872 315 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AP001521.2-201ENST00000608772 546 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AC019206.1-201ENST00000621938 425 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 AC020763.5-201ENST00000623298 430 ntBASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.1□□□□□ -1.59
RFWD3Q6PCD5 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC083843.3-201ENST00000623679 2186 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 SOCS5P3-201ENST00000425115 1576 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC092111.2-201ENST00000611627 1414 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 HMGB3P7-201ENST00000400214 611 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AL357515.1-201ENST00000402967 542 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 GTF2IP5-201ENST00000414608 731 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC073648.4-201ENST00000442655 781 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 RPS17P2-201ENST00000461663 408 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 GAPDHP56-201ENST00000506031 988 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AL671862.1-201ENST00000515851 349 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 RNU4-18P-201ENST00000516751 149 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC105031.1-201ENST00000518550 476 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 TVP23CP2-201ENST00000571473 623 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AC011453.2-201ENST00000603737 729 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AL049794.2-201ENST00000616301 365 ntBASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.09□□□□□ -1.59
RFWD3Q6PCD5 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.09□□□□□ -1.6
RFWD3Q6PCD5 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFWD3Q6PCD5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RFWD3Q6PCD5 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RFWD3Q6PCD5 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
RFWD3Q6PCD5 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.09□□□□□ -1.6
RFWD3Q6PCD5 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
RFWD3Q6PCD5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL672167.1-205ENST00000641112 3080 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 MTCO1P8-201ENST00000416914 1523 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL035419.1-201ENST00000397037 564 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 RNA5SP296-201ENST00000410523 111 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 TBCAP2-201ENST00000416175 326 ntBASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.08□□□□□ -1.6
RFWD3Q6PCD5 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms