Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 SNRPFP2-201ENST00000440710 251 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RPL36AP39-201ENST00000445859 318 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 HMGN1P36-201ENST00000446623 298 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RNU6-599P-201ENST00000459383 107 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RNU6-1193P-201ENST00000459461 107 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RN7SL168P-201ENST00000463821 279 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC006967.1-201ENST00000467608 589 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RPL37P23-201ENST00000492641 294 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RN7SL558P-201ENST00000497468 299 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RNA5SP154-201ENST00000516193 111 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC022826.1-201ENST00000519383 805 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC135626.1-201ENST00000556983 435 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RNU6-368P-201ENST00000620928 107 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 RNU6-538P-201ENST00000622329 107 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC58Q4VC31 AC090971.4-201ENST00000560291 1800 ntBASIC4.35□□□□□ -1.71
CCDC58Q4VC31 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC016588.2-201ENST00000632484 3021 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 RNU1-20P-201ENST00000363314 162 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 RNU1-83P-201ENST00000363426 164 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 SNORA70.10-201ENST00000384515 134 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 SNORA66-201ENST00000384792 133 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC009804.1-201ENST00000400949 179 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AL136116.2-201ENST00000404020 785 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 VN1R37P-201ENST00000419096 748 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 PDSS1P1-201ENST00000422953 1114 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC005033.1-201ENST00000428904 813 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC004938.1-201ENST00000438468 308 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC084754.1-201ENST00000463466 464 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 RPS21P4-201ENST00000487122 248 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 RN7SL547P-201ENST00000490793 290 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 RN7SL466P-201ENST00000497546 295 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 PRELID3BP7-201ENST00000503606 469 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC018797.3-201ENST00000513388 1241 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC026688.1-201ENST00000520639 1168 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 BUD31P1-201ENST00000521828 359 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC079075.1-201ENST00000559543 878 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC095055.1-201ENST00000603472 1113 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC104695.2-201ENST00000605056 775 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC012414.7-202ENST00000622705 1090 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC067852.7-201ENST00000623270 535 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 AC243960.7-201ENST00000623532 707 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 RLIMP2-201ENST00000427891 1563 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 USP9YP4-201ENST00000424401 1745 ntBASIC4.34□□□□□ -1.71
CCDC58Q4VC31 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CCDC58Q4VC31 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC58Q4VC31 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.34□□□□□ -1.72
CCDC58Q4VC31 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC58Q4VC31 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
CCDC58Q4VC31 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 RNA5SP52-201ENST00000362448 134 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 MIR93-201ENST00000385024 80 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 NCSTNP1-201ENST00000406229 144 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.33□□□□□ -1.72
CCDC58Q4VC31 VDAC1P9-201ENST00000412766 841 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 CEACAMP8-201ENST00000413902 580 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AC009302.1-201ENST00000417147 390 ntBASIC4.33□□□□□ -1.72
CCDC58Q4VC31 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms