Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 BX276092.8-201ENST00000455722 250 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 RNU6-599P-201ENST00000459383 107 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 RNU6-1193P-201ENST00000459461 107 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AC108751.3-201ENST00000461814 1020 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AC107015.1-201ENST00000466902 747 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 RPL12P20-201ENST00000475538 479 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 IGBP1P5-201ENST00000507524 1000 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNA1P78396 AC097486.1-201ENST00000515331 210 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNA1P78396 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.63□□□□□ -1.51
CCNA1P78396 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNA1P78396 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 AP000919.1-201ENST00000582850 985 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNA1P78396 FAM27B-201ENST00000610601 213 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNA1P78396 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.63□□□□□ -1.51
CCNA1P78396 AC009704.2-201ENST00000618739 483 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 RNU6-368P-201ENST00000620928 107 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 RNU6-538P-201ENST00000622329 107 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AC087821.1-201ENST00000623639 567 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
CCNA1P78396 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.63□□□□□ -1.51
CCNA1P78396 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.63□□□□□ -1.51
CCNA1P78396 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CCNA1P78396 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CCNA1P78396 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 AL132640.2-201ENST00000559968 1698 ntBASIC5.63□□□□□ -1.51
CCNA1P78396 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.63□□□□□ -1.51
CCNA1P78396 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CCNA1P78396 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNA1P78396 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNA1P78396 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.62□□□□□ -1.51
CCNA1P78396 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNA1P78396 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNA1P78396 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
CCNA1P78396 RN7SKP145-201ENST00000363291 303 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCNA1P78396 RNA5SP241-201ENST00000391326 114 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNA1P78396 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.62□□□□□ -1.51
CCNA1P78396 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.62□□□□□ -1.51
CCNA1P78396 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.62□□□□□ -1.51
CCNA1P78396 OR52Y1P-201ENST00000452418 828 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 AC026979.1-201ENST00000492525 396 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 AGGF1P3-201ENST00000493675 1213 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC5.62□□□□□ -1.51
CCNA1P78396 BUD31P1-201ENST00000521828 359 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNA1P78396 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.62□□□□□ -1.51
CCNA1P78396 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CCNA1P78396 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.62□□□□□ -1.51
CCNA1P78396 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNA1P78396 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.62□□□□□ -1.51
CCNA1P78396 RNA5SP439-201ENST00000617595 124 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 AL359757.1-201ENST00000623176 255 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 AC243960.7-201ENST00000623532 707 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 AC010928.1-201ENST00000592477 1447 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CCNA1P78396 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCNA1P78396 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CCNA1P78396 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.62□□□□□ -1.51
CCNA1P78396 ADAM24P-201ENST00000398655 2101 ntBASIC5.62□□□□□ -1.51
CCNA1P78396 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
CCNA1P78396 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.61□□□□□ -1.51
CCNA1P78396 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNA1P78396 AC133552.1-201ENST00000569988 4007 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CCNA1P78396 AL590240.1-201ENST00000334118 313 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 AC007618.1-201ENST00000366455 732 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNA1P78396 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 AL672167.2-201ENST00000377164 879 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 SNORA70F-201ENST00000384142 135 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 LRRC37BP1-201ENST00000398851 714 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 RSU1P3-201ENST00000412878 835 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 AC244033.1-201ENST00000426826 870 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.61□□□□□ -1.51
CCNA1P78396 OR2B7P-201ENST00000429302 934 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 AL138787.1-202ENST00000437804 898 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNA1P78396 AC005412.2-201ENST00000492004 341 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CCNA1P78396 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.61□□□□□ -1.51
CCNA1P78396 SCARNA22-201ENST00000503991 125 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNA1P78396 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CCNA1P78396 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.61□□□□□ -1.51
CCNA1P78396 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.61□□□□□ -1.51
CCNA1P78396 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.61□□□□□ -1.51
CCNA1P78396 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.61□□□□□ -1.51
CCNA1P78396 AC122134.1-201ENST00000565664 1104 ntBASIC5.61□□□□□ -1.51
CCNA1P78396 MIR4715-201ENST00000584117 79 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms