Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.08□□□□□ -1.44
YBX1P67809 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
YBX1P67809 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
YBX1P67809 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
YBX1P67809 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.08□□□□□ -1.44
YBX1P67809 AC010329.1-201ENST00000593903 8328 ntBASIC6.08□□□□□ -1.44
YBX1P67809 AC125238.2-201ENST00000430003 1440 ntBASIC6.08□□□□□ -1.44
YBX1P67809 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.08□□□□□ -1.44
YBX1P67809 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
YBX1P67809 OR52B5P-204ENST00000641744 3467 ntBASIC6.07□□□□□ -1.44
YBX1P67809 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 RNA5SP110-201ENST00000362638 115 ntBASIC6.07□□□□□ -1.44
YBX1P67809 Y_RNA.408-201ENST00000383987 102 ntBASIC6.07□□□□□ -1.44
YBX1P67809 SNORA70.9-201ENST00000384370 135 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AL121977.1-201ENST00000401636 979 ntBASIC6.07□□□□□ -1.44
YBX1P67809 RN7SKP108-201ENST00000411367 328 ntBASIC6.07□□□□□ -1.44
YBX1P67809 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC6.07□□□□□ -1.44
YBX1P67809 AL035422.1-201ENST00000414193 397 ntBASIC6.07□□□□□ -1.44
YBX1P67809 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 AL109913.1-201ENST00000421173 514 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC007562.1-201ENST00000421819 517 ntBASIC6.07□□□□□ -1.44
YBX1P67809 GTF2IP23-201ENST00000423746 351 ntBASIC6.07□□□□□ -1.44
YBX1P67809 OR5AW1P-201ENST00000426334 1006 ntBASIC6.07□□□□□ -1.44
YBX1P67809 MTND1P14-201ENST00000427400 950 ntBASIC6.07□□□□□ -1.44
YBX1P67809 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 B3GNT2P1-201ENST00000434960 952 ntBASIC6.07□□□□□ -1.44
YBX1P67809 TCEA1P3-201ENST00000443005 880 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.07□□□□□ -1.44
YBX1P67809 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC6.07□□□□□ -1.44
YBX1P67809 AC023274.2-201ENST00000445264 521 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.07□□□□□ -1.44
YBX1P67809 EEF1B2P3-201ENST00000447718 678 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AL118496.2-201ENST00000448300 230 ntBASIC6.07□□□□□ -1.44
YBX1P67809 FAR2P1-206ENST00000449736 709 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 HMGB1P5-202ENST00000451497 985 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC092001.1-201ENST00000453012 261 ntBASIC6.07□□□□□ -1.44
YBX1P67809 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 AC005017.1-201ENST00000482002 490 ntBASIC6.07□□□□□ -1.44
YBX1P67809 RPS26P24-201ENST00000497656 331 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC091874.2-201ENST00000505889 720 ntBASIC6.07□□□□□ -1.44
YBX1P67809 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.07□□□□□ -1.44
YBX1P67809 OR4D12P-201ENST00000509361 911 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC117522.1-201ENST00000509821 380 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC106800.3-201ENST00000511389 308 ntBASIC6.07□□□□□ -1.44
YBX1P67809 RNU6-506P-201ENST00000516553 94 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.07□□□□□ -1.44
YBX1P67809 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 CYCSP25-201ENST00000525280 316 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC036111.2-201ENST00000533247 901 ntBASIC6.07□□□□□ -1.44
YBX1P67809 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 OR6C7P-201ENST00000547875 934 ntBASIC6.07□□□□□ -1.44
YBX1P67809 ANP32BP3-201ENST00000559213 706 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.07□□□□□ -1.44
YBX1P67809 AL591167.1-201ENST00000607321 456 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AL159169.3-201ENST00000608871 561 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC092954.2-201ENST00000609103 430 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC007497.1-201ENST00000610421 561 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AL135999.3-201ENST00000610501 812 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC007014.2-201ENST00000615581 479 ntBASIC6.07□□□□□ -1.44
YBX1P67809 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 MFSD8-245ENST00000641743 948 ntBASIC6.07□□□□□ -1.44
YBX1P67809 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 ELF2P3-201ENST00000445099 1506 ntBASIC6.07□□□□□ -1.44
YBX1P67809 AC009135.2-201ENST00000624136 1768 ntBASIC6.07□□□□□ -1.44
YBX1P67809 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
YBX1P67809 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.07□□□□□ -1.44
YBX1P67809 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
YBX1P67809 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
YBX1P67809 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
YBX1P67809 AC009779.8-201ENST00000641684 4384 ntBASIC6.06□□□□□ -1.44
YBX1P67809 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
YBX1P67809 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
YBX1P67809 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.06□□□□□ -1.44
YBX1P67809 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
YBX1P67809 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms