Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AL645931.1-201ENST00000439737 410 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NR1H2P55055 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NR1H2P55055 AL096803.2-201ENST00000450032 677 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 RNU1-88P-201ENST00000459274 128 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC018635.1-201ENST00000468292 1030 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.3□□□□□ -1.56
NR1H2P55055 RN7SL177P-201ENST00000476596 299 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AL161747.1-201ENST00000480068 358 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC083795.1-201ENST00000491760 320 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 TPT1P8-201ENST00000510120 555 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 RPL7L1P4-201ENST00000513004 707 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 Y_RNA.667-201ENST00000516212 107 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 RNA5SP438-201ENST00000516561 112 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 SCARNA1-201ENST00000517138 166 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC027308.1-201ENST00000517993 110 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC079064.1-201ENST00000528365 362 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NR1H2P55055 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC091078.2-201ENST00000557145 559 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AGGF1P9-201ENST00000561884 913 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC093591.2-201ENST00000565254 3843 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
NR1H2P55055 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.3□□□□□ -1.56
NR1H2P55055 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.3□□□□□ -1.56
NR1H2P55055 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.3□□□□□ -1.56
NR1H2P55055 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NR1H2P55055 AL136131.3-201ENST00000607600 188 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AL355816.2-201ENST00000610049 647 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AC096586.1-201ENST00000610267 561 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AL035661.1-201ENST00000620459 1144 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 AL356118.1-201ENST00000635272 1078 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NR1H2P55055 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NR1H2P55055 AL731566.1-201ENST00000620490 1937 ntBASIC5.3□□□□□ -1.56
NR1H2P55055 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
NR1H2P55055 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NR1H2P55055 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NR1H2P55055 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
NR1H2P55055 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 AC104964.3-201ENST00000606115 2860 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.29□□□□□ -1.56
NR1H2P55055 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 DNAJC19P6-201ENST00000401853 280 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 HMGB3P18-201ENST00000406327 590 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 RN7SKP97-201ENST00000410966 333 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 RNU6-603P-201ENST00000411403 107 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC092745.2-202ENST00000411880 369 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AL024507.1-201ENST00000412741 274 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC241520.1-201ENST00000422654 1099 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.29□□□□□ -1.56
NR1H2P55055 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC5.29□□□□□ -1.56
NR1H2P55055 RPL34P6-201ENST00000432390 345 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 PPIAP13-201ENST00000434706 478 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AL353597.2-202ENST00000434901 373 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 PCBP2P1-201ENST00000437262 977 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC092170.1-201ENST00000440211 356 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 AC044797.1-201ENST00000445744 679 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.29□□□□□ -1.56
NR1H2P55055 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 MEMO1P4-201ENST00000453590 386 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 GTF2IP12-201ENST00000456547 356 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 PPIAP21-201ENST00000464473 501 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC011476.1-201ENST00000466725 307 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.29□□□□□ -1.56
NR1H2P55055 AC023245.1-201ENST00000468501 517 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AL122020.1-201ENST00000472287 459 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.29□□□□□ -1.56
NR1H2P55055 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
NR1H2P55055 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.29□□□□□ -1.56
NR1H2P55055 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.29□□□□□ -1.56
NR1H2P55055 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.29□□□□□ -1.56
NR1H2P55055 RNU6-347P-201ENST00000516658 105 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
NR1H2P55055 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.29□□□□□ -1.56
NR1H2P55055 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.29□□□□□ -1.56
NR1H2P55055 AL121594.4-201ENST00000556211 1196 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 AC051619.2-201ENST00000559063 397 ntBASIC5.29□□□□□ -1.56
NR1H2P55055 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.29□□□□□ -1.56
NR1H2P55055 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.29□□□□□ -1.56
NR1H2P55055 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms