Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
MRE11P49959 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.53□□□□□ -1.36
MRE11P49959 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MRE11P49959 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
MRE11P49959 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.36
MRE11P49959 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.52□□□□□ -1.36
MRE11P49959 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.52□□□□□ -1.37
MRE11P49959 MFSD8-213ENST00000641134 1327 ntBASIC6.52□□□□□ -1.37
MRE11P49959 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.52□□□□□ -1.37
MRE11P49959 AL078621.3-201ENST00000623707 2042 ntBASIC6.52□□□□□ -1.37
MRE11P49959 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
MRE11P49959 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.52□□□□□ -1.37
MRE11P49959 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MRE11P49959 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MRE11P49959 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.52□□□□□ -1.37
MRE11P49959 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
MRE11P49959 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MRE11P49959 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MRE11P49959 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MRE11P49959 RNU6-468P-201ENST00000384003 109 ntBASIC6.52□□□□□ -1.37
MRE11P49959 RNU6-171P-201ENST00000384354 107 ntBASIC6.52□□□□□ -1.37
MRE11P49959 RNU6-906P-201ENST00000384700 70 ntBASIC6.52□□□□□ -1.37
MRE11P49959 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MRE11P49959 AC119751.3-201ENST00000399720 670 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AL589994.1-201ENST00000404962 340 ntBASIC6.52□□□□□ -1.37
MRE11P49959 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 USP9YP24-201ENST00000434374 697 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AC015983.1-201ENST00000441577 373 ntBASIC6.52□□□□□ -1.37
MRE11P49959 USP9YP17-201ENST00000444617 696 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MRE11P49959 AC044797.1-201ENST00000445744 679 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 GYG1P1-201ENST00000460864 698 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AC010468.1-201ENST00000461022 817 ntBASIC6.52□□□□□ -1.37
MRE11P49959 RPL21P18-201ENST00000469899 480 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AC020779.1-201ENST00000478757 796 ntBASIC6.52□□□□□ -1.37
MRE11P49959 SIAH1P1-201ENST00000479411 923 ntBASIC6.52□□□□□ -1.37
MRE11P49959 CREM-238ENST00000488741 651 ntTSL 2 BASIC6.52□□□□□ -1.37
MRE11P49959 AC083795.1-201ENST00000491760 320 ntBASIC6.52□□□□□ -1.37
MRE11P49959 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC6.52□□□□□ -1.37
MRE11P49959 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.52□□□□□ -1.37
MRE11P49959 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 PIGPP4-201ENST00000584447 307 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 AC015849.2-201ENST00000605738 409 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.52□□□□□ -1.37
MRE11P49959 AC079395.2-201ENST00000610982 737 ntBASIC6.52□□□□□ -1.37
MRE11P49959 AC004232.3-201ENST00000622977 525 ntBASIC6.52□□□□□ -1.37
MRE11P49959 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
MRE11P49959 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MRE11P49959 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.52□□□□□ -1.37
MRE11P49959 CASC19-255ENST00000641733 1385 ntBASIC6.52□□□□□ -1.37
MRE11P49959 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
MRE11P49959 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.52□□□□□ -1.37
MRE11P49959 CR382285.2-201ENST00000624662 1495 ntBASIC6.52□□□□□ -1.37
MRE11P49959 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MRE11P49959 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MRE11P49959 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MRE11P49959 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
MRE11P49959 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MRE11P49959 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 AC027088.4-201ENST00000611559 1947 ntBASIC6.51□□□□□ -1.37
MRE11P49959 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
MRE11P49959 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
MRE11P49959 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
MRE11P49959 SKINT1L-201ENST00000401057 817 ntBASIC6.51□□□□□ -1.37
MRE11P49959 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.51□□□□□ -1.37
MRE11P49959 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC6.51□□□□□ -1.37
MRE11P49959 TRIM60P17-201ENST00000415181 719 ntBASIC6.51□□□□□ -1.37
MRE11P49959 USP9YP11-201ENST00000427537 717 ntBASIC6.51□□□□□ -1.37
MRE11P49959 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.51□□□□□ -1.37
MRE11P49959 MED6P1-201ENST00000439659 713 ntBASIC6.51□□□□□ -1.37
MRE11P49959 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.51□□□□□ -1.37
MRE11P49959 AC073465.2-201ENST00000440938 498 ntBASIC6.51□□□□□ -1.37
MRE11P49959 CR769776.1-201ENST00000441254 787 ntBASIC6.51□□□□□ -1.37
MRE11P49959 OR10R1P-201ENST00000441524 1141 ntBASIC6.51□□□□□ -1.37
MRE11P49959 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms