Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSR1P43307 AL121950.1-201ENST00000624993 2077 ntBASIC5.35□□□□□ -1.55
SSR1P43307 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.35□□□□□ -1.55
SSR1P43307 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.35□□□□□ -1.55
SSR1P43307 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSR1P43307 AC100778.3-201ENST00000580060 1750 ntBASIC5.35□□□□□ -1.55
SSR1P43307 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.35□□□□□ -1.55
SSR1P43307 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SSR1P43307 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSR1P43307 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSR1P43307 RNA5SP502-201ENST00000362694 119 ntBASIC5.35□□□□□ -1.55
SSR1P43307 RN7SKP113-201ENST00000363891 295 ntBASIC5.35□□□□□ -1.55
SSR1P43307 RN7SKP126-201ENST00000411143 300 ntBASIC5.35□□□□□ -1.55
SSR1P43307 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.35□□□□□ -1.55
SSR1P43307 NPM1P4-201ENST00000414095 812 ntBASIC5.35□□□□□ -1.55
SSR1P43307 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.35□□□□□ -1.55
SSR1P43307 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.35□□□□□ -1.55
SSR1P43307 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.35□□□□□ -1.55
SSR1P43307 AL031584.1-201ENST00000447169 754 ntBASIC5.35□□□□□ -1.55
SSR1P43307 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
SSR1P43307 NDUFB4P11-201ENST00000560510 395 ntBASIC5.35□□□□□ -1.55
SSR1P43307 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSR1P43307 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.35□□□□□ -1.55
SSR1P43307 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.35□□□□□ -1.55
SSR1P43307 CASC19-264ENST00000641912 1184 ntBASIC5.35□□□□□ -1.55
SSR1P43307 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SSR1P43307 SALL4P2-201ENST00000423288 2910 ntBASIC5.35□□□□□ -1.55
SSR1P43307 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.35□□□□□ -1.55
SSR1P43307 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.35□□□□□ -1.55
SSR1P43307 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.34□□□□□ -1.55
SSR1P43307 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.34□□□□□ -1.55
SSR1P43307 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SSR1P43307 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.34□□□□□ -1.55
SSR1P43307 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.34□□□□□ -1.55
SSR1P43307 OR11H5P-202ENST00000641612 1325 ntBASIC5.34□□□□□ -1.55
SSR1P43307 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSR1P43307 RN7SKP160-201ENST00000363804 340 ntBASIC5.34□□□□□ -1.55
SSR1P43307 MIR143-201ENST00000385300 106 ntBASIC5.34□□□□□ -1.55
SSR1P43307 SEPT7P8-201ENST00000413308 775 ntBASIC5.34□□□□□ -1.55
SSR1P43307 OR2X1P-201ENST00000421144 687 ntBASIC5.34□□□□□ -1.55
SSR1P43307 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC5.34□□□□□ -1.55
SSR1P43307 AC104333.2-201ENST00000422630 192 ntBASIC5.34□□□□□ -1.55
SSR1P43307 SEC63P1-201ENST00000425785 1258 ntBASIC5.34□□□□□ -1.55
SSR1P43307 AL139148.1-201ENST00000427122 680 ntBASIC5.34□□□□□ -1.55
SSR1P43307 RPS6P12-201ENST00000432491 726 ntBASIC5.34□□□□□ -1.55
SSR1P43307 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.34□□□□□ -1.55
SSR1P43307 RPL12P11-201ENST00000439970 501 ntBASIC5.34□□□□□ -1.55
SSR1P43307 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.34□□□□□ -1.55
SSR1P43307 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.34□□□□□ -1.55
SSR1P43307 IFNWP4-201ENST00000453148 294 ntBASIC5.34□□□□□ -1.55
SSR1P43307 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.34□□□□□ -1.55
SSR1P43307 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.34□□□□□ -1.55
SSR1P43307 PGAM1P13-201ENST00000507497 754 ntBASIC5.34□□□□□ -1.55
SSR1P43307 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.34□□□□□ -1.55
SSR1P43307 AC105031.1-201ENST00000518550 476 ntBASIC5.34□□□□□ -1.55
SSR1P43307 AC090281.1-201ENST00000523019 276 ntBASIC5.34□□□□□ -1.55
SSR1P43307 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SSR1P43307 AC134349.2-201ENST00000535136 910 ntBASIC5.34□□□□□ -1.55
SSR1P43307 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.34□□□□□ -1.55
SSR1P43307 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.34□□□□□ -1.55
SSR1P43307 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.34□□□□□ -1.55
SSR1P43307 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.34□□□□□ -1.55
SSR1P43307 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.34□□□□□ -1.55
SSR1P43307 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.34□□□□□ -1.55
SSR1P43307 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.34□□□□□ -1.55
SSR1P43307 AC018695.5-201ENST00000605872 315 ntBASIC5.34□□□□□ -1.55
SSR1P43307 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.34□□□□□ -1.55
SSR1P43307 AP005131.7-201ENST00000610087 611 ntBASIC5.34□□□□□ -1.55
SSR1P43307 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.34□□□□□ -1.55
SSR1P43307 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SSR1P43307 AL049555.1-201ENST00000562834 1933 ntBASIC5.34□□□□□ -1.55
SSR1P43307 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.34□□□□□ -1.56
SSR1P43307 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
SSR1P43307 USP9YP4-201ENST00000424401 1745 ntBASIC5.34□□□□□ -1.56
SSR1P43307 AL356489.2-201ENST00000566968 3528 ntBASIC5.34□□□□□ -1.56
SSR1P43307 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSR1P43307 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSR1P43307 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.33□□□□□ -1.56
SSR1P43307 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSR1P43307 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
SSR1P43307 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.33□□□□□ -1.56
SSR1P43307 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SSR1P43307 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SSR1P43307 AL353625.1-202ENST00000366273 571 ntBASIC5.33□□□□□ -1.56
SSR1P43307 U3.25-201ENST00000391209 220 ntBASIC5.33□□□□□ -1.56
SSR1P43307 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SSR1P43307 MIR1182-201ENST00000408363 97 ntBASIC5.33□□□□□ -1.56
SSR1P43307 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SSR1P43307 AL450992.3-201ENST00000413192 568 ntBASIC5.33□□□□□ -1.56
SSR1P43307 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.33□□□□□ -1.56
SSR1P43307 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.33□□□□□ -1.56
SSR1P43307 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.33□□□□□ -1.56
SSR1P43307 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.33□□□□□ -1.56
SSR1P43307 FHP1-201ENST00000442741 703 ntBASIC5.33□□□□□ -1.56
SSR1P43307 MRPL35P2-201ENST00000448009 511 ntBASIC5.33□□□□□ -1.56
SSR1P43307 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.33□□□□□ -1.56
SSR1P43307 AL606490.1-201ENST00000452266 765 ntBASIC5.33□□□□□ -1.56
SSR1P43307 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.33□□□□□ -1.56
SSR1P43307 TRBV8-1-201ENST00000481590 279 ntBASIC5.33□□□□□ -1.56
SSR1P43307 AC005412.2-201ENST00000492004 341 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms