Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AP003117.1-201ENST00000602771 554 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 AC098935.2-201ENST00000604222 466 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.35□□□□□ -1.39
COL15A1P39059 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC6.35□□□□□ -1.39
COL15A1P39059 AC017076.1-201ENST00000607613 578 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
COL15A1P39059 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.35□□□□□ -1.39
COL15A1P39059 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6.35□□□□□ -1.39
COL15A1P39059 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.35□□□□□ -1.39
COL15A1P39059 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL15A1P39059 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.35□□□□□ -1.39
COL15A1P39059 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
COL15A1P39059 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.35□□□□□ -1.39
COL15A1P39059 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.35□□□□□ -1.39
COL15A1P39059 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.35□□□□□ -1.39
COL15A1P39059 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.35□□□□□ -1.39
COL15A1P39059 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL15A1P39059 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
COL15A1P39059 AC004158.1-201ENST00000564508 4319 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL15A1P39059 DDX6P1-205ENST00000441966 1436 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 SAMM50P1-201ENST00000455403 1399 ntBASIC6.35□□□□□ -1.39
COL15A1P39059 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
COL15A1P39059 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.35□□□□□ -1.39
COL15A1P39059 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
COL15A1P39059 SMG1P7-201ENST00000565246 2704 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.34□□□□□ -1.39
COL15A1P39059 RPS3AP23-201ENST00000401762 784 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AL356057.1-202ENST00000402263 756 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AL390316.1-201ENST00000406279 553 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AMZ2P2-201ENST00000406819 1057 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 COX5BP7-201ENST00000414780 274 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AC009480.2-201ENST00000422916 432 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.34□□□□□ -1.39
COL15A1P39059 RPL12P20-201ENST00000475538 479 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AC026979.1-201ENST00000492525 396 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.34□□□□□ -1.39
COL15A1P39059 HMGN1P15-201ENST00000513870 295 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 RNA5SP392-201ENST00000516905 112 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 OR4V1P-201ENST00000525394 1140 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.34□□□□□ -1.39
COL15A1P39059 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.34□□□□□ -1.39
COL15A1P39059 AC019322.1-201ENST00000571869 389 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.34□□□□□ -1.39
COL15A1P39059 MIR4284-201ENST00000578924 81 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AC009704.2-201ENST00000618739 483 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AC097372.4-201ENST00000625025 466 ntBASIC6.34□□□□□ -1.39
COL15A1P39059 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC6.34□□□□□ -1.39
COL15A1P39059 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
COL15A1P39059 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
COL15A1P39059 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
COL15A1P39059 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.34□□□□□ -1.39
COL15A1P39059 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.34□□□□□ -1.39
COL15A1P39059 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
COL15A1P39059 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL15A1P39059 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
COL15A1P39059 ZNF652P1-201ENST00000442420 1309 ntBASIC6.34□□□□□ -1.4
COL15A1P39059 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
COL15A1P39059 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
COL15A1P39059 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL15A1P39059 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
COL15A1P39059 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL15A1P39059 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
COL15A1P39059 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL15A1P39059 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL15A1P39059 RPL12P9-201ENST00000412942 488 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.33□□□□□ -1.4
COL15A1P39059 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.33□□□□□ -1.4
COL15A1P39059 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 RNF19BPX-201ENST00000426224 625 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 AC073508.1-201ENST00000428866 656 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC6.33□□□□□ -1.4
COL15A1P39059 RPS17P2-201ENST00000461663 408 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 NPM1P21-201ENST00000513394 762 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 RN7SKP157-201ENST00000516174 282 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 RN7SKP276-201ENST00000516242 268 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.33□□□□□ -1.4
COL15A1P39059 AC020937.1-201ENST00000519677 1013 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.33□□□□□ -1.4
COL15A1P39059 AC012339.2-201ENST00000523996 453 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 SOX5P1-201ENST00000524155 1127 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.33□□□□□ -1.4
COL15A1P39059 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC6.33□□□□□ -1.4
COL15A1P39059 ATP5J2P6-201ENST00000565203 266 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 AC027281.1-201ENST00000574178 758 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.33□□□□□ -1.4
COL15A1P39059 AC090330.1-201ENST00000588646 764 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 RPL26P30-202ENST00000602923 645 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 AC018695.5-201ENST00000605872 315 ntBASIC6.33□□□□□ -1.4
COL15A1P39059 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms