Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 RPS26P41-201ENST00000450370 284 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AL591473.1-201ENST00000464297 313 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 RN7SL547P-201ENST00000490793 290 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 RN7SL466P-201ENST00000497546 295 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 RNA5SP303-201ENST00000516192 130 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.38□□□□□ -1.55
CTNNA1P35221 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AC022404.1-201ENST00000555320 273 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.38□□□□□ -1.55
CTNNA1P35221 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AC011472.4-201ENST00000615848 491 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.38□□□□□ -1.55
CTNNA1P35221 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.38□□□□□ -1.55
CTNNA1P35221 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.38□□□□□ -1.55
CTNNA1P35221 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
CTNNA1P35221 AC135068.12-201ENST00000637370 931 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 AC235565.1-201ENST00000456962 1325 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CTNNA1P35221 ASNSP1-201ENST00000518311 1939 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 DDX18P3-201ENST00000404856 2007 ntBASIC5.38□□□□□ -1.55
CTNNA1P35221 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CTNNA1P35221 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA1P35221 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CTNNA1P35221 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
CTNNA1P35221 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA1P35221 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA1P35221 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNA1P35221 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA1P35221 AC126323.6-202ENST00000568092 3511 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNA1P35221 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA1P35221 TMSB4XP4-201ENST00000323496 618 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 ATP5HP3-201ENST00000396994 486 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 CHMP1B2P-201ENST00000399581 597 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 MIR1182-201ENST00000408363 97 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC013429.2-201ENST00000418798 781 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA1P35221 RPL36AP10-201ENST00000421785 322 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 CYCSP6-201ENST00000434498 302 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA1P35221 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA1P35221 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA1P35221 RPL31P15-201ENST00000449770 338 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA1P35221 AC091180.1-201ENST00000462104 372 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 RN7SL441P-201ENST00000492388 296 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC073073.1-201ENST00000493920 463 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA1P35221 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA1P35221 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA1P35221 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.37□□□□□ -1.55
CTNNA1P35221 AL512310.9-201ENST00000553311 948 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AGGF1P9-201ENST00000561884 913 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNA1P35221 AC016957.2-201ENST00000616998 848 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC022106.2-201ENST00000620114 757 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC079298.2-201ENST00000623885 459 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AC104820.1-201ENST00000624183 307 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 CYP4F35P-202ENST00000636121 390 ntBASIC5.37□□□□□ -1.55
CTNNA1P35221 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA1P35221 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNA1P35221 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
CTNNA1P35221 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.37□□□□□ -1.55
CTNNA1P35221 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA1P35221 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA1P35221 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CTNNA1P35221 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.37□□□□□ -1.55
CTNNA1P35221 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CTNNA1P35221 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CTNNA1P35221 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.36□□□□□ -1.55
CTNNA1P35221 SETP15-201ENST00000412724 337 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC5.36□□□□□ -1.55
CTNNA1P35221 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.36□□□□□ -1.55
CTNNA1P35221 AC093655.2-201ENST00000425735 631 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.36□□□□□ -1.55
CTNNA1P35221 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.36□□□□□ -1.55
CTNNA1P35221 FAM96AP1-201ENST00000430879 482 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 Z92846.1-201ENST00000456203 268 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.36□□□□□ -1.55
CTNNA1P35221 PPIAP21-201ENST00000464473 501 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC5.36□□□□□ -1.55
CTNNA1P35221 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.36□□□□□ -1.55
CTNNA1P35221 AC138938.1-201ENST00000515431 782 ntBASIC5.36□□□□□ -1.55
CTNNA1P35221 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CTNNA1P35221 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.36□□□□□ -1.55
CTNNA1P35221 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
CTNNA1P35221 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.36□□□□□ -1.55
CTNNA1P35221 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms