Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 FAM27B-201ENST00000610601 213 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AC083809.1-201ENST00000615051 472 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 AC243960.7-201ENST00000623532 707 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXA9P31269 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA9P31269 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA9P31269 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA9P31269 Z98755.1-201ENST00000407015 1384 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HOXA9P31269 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HOXA9P31269 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HOXA9P31269 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
HOXA9P31269 KARSP3-201ENST00000571212 1504 ntBASIC5.12□□□□□ -1.59
HOXA9P31269 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 AL022311.1-201ENST00000623726 19416 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 SNORA73.1-201ENST00000363107 205 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXA9P31269 AL356967.1-201ENST00000406305 431 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA9P31269 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA9P31269 CYCSP11-201ENST00000436426 315 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 AL691482.1-201ENST00000453255 87 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 RPL10P17-201ENST00000453852 316 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXA9P31269 RPL12P20-201ENST00000475538 479 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA9P31269 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA9P31269 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC027369.5-201ENST00000533838 755 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC040958.1-201ENST00000561102 201 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 MTCYBP13-201ENST00000578634 1093 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC020915.5-201ENST00000596836 964 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 SMG1P7-201ENST00000565246 2704 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 AC010928.1-201ENST00000592477 1447 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 SMG1P6-201ENST00000532337 2930 ntBASIC5.11□□□□□ -1.59
HOXA9P31269 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA9P31269 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXA9P31269 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXA9P31269 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXA9P31269 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA9P31269 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HOXA9P31269 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXA9P31269 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXA9P31269 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA9P31269 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA9P31269 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA9P31269 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA9P31269 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXA9P31269 MIR129-1-201ENST00000384972 72 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 AL049697.2-201ENST00000403708 294 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 AL121878.1-201ENST00000418638 859 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 OR2B7P-201ENST00000429302 934 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 AL591623.2-201ENST00000449978 222 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 AC002553.2-201ENST00000453217 340 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXA9P31269 AC104971.1-201ENST00000495117 578 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.1□□□□□ -1.59
HOXA9P31269 ENPP7P11-201ENST00000505915 627 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 Y_RNA.719-201ENST00000517156 106 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 AC009643.1-201ENST00000532030 391 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.1□□□□□ -1.59
HOXA9P31269 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXA9P31269 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
HOXA9P31269 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA9P31269 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA9P31269 AC022726.1-201ENST00000587475 207 ntBASIC5.1□□□□□ -1.59
HOXA9P31269 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA9P31269 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXA9P31269 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HOXA9P31269 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HOXA9P31269 AC008758.3-201ENST00000507003 1829 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 AL356317.1-201ENST00000396110 1436 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
HOXA9P31269 AC007382.1-201ENST00000624376 2618 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 AL590240.1-201ENST00000334118 313 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 SNORD113.2-201ENST00000364166 89 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 SNORA70.2-201ENST00000364506 135 ntBASIC5.09□□□□□ -1.59
HOXA9P31269 RNU6-673P-201ENST00000365084 104 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms