Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 SNORA73.1-201ENST00000363107 205 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 EEF1B2P8-201ENST00000414101 671 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 RPS20P1-201ENST00000434853 354 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AL390119.1-201ENST00000440329 312 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AL450023.3-201ENST00000440592 271 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 SCARNA10-201ENST00000459255 330 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC108022.1-201ENST00000493466 478 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC068446.3-201ENST00000555285 382 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC067773.1-201ENST00000603284 1094 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC020634.1-201ENST00000608701 549 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AC023509.5-201ENST00000617434 807 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AP003072.5-201ENST00000623872 773 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 AP000756.2-201ENST00000624168 2567 ntBASIC4.22□□□□□ -1.73
HLA-DMAP28067 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
HLA-DMAP28067 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.22□□□□□ -1.73
HLA-DMAP28067 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
HLA-DMAP28067 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 RNA5SP234-201ENST00000363916 119 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 RAB9AP4-201ENST00000415230 609 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC096644.3-201ENST00000416788 338 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 OR2AM1P-201ENST00000422137 422 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 EI24P4-201ENST00000423683 1078 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC244033.1-201ENST00000426826 870 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 SKP1P3-201ENST00000429280 487 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 MTND2P2-201ENST00000434633 945 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC002504.1-201ENST00000438281 691 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 SUMO2P3-201ENST00000438311 288 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 RPL7P33-201ENST00000444159 742 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 CASP3P1-201ENST00000446037 609 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 RANP1-206ENST00000455094 651 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 HMGB1P4-201ENST00000455362 567 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC012158.1-204ENST00000483430 465 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 VWA8P1-201ENST00000510889 176 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 RNU6-941P-201ENST00000516346 108 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 MIR4505-201ENST00000582238 73 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.21□□□□□ -1.74
HLA-DMAP28067 AL591926.1-201ENST00000620542 217 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AC021106.3-201ENST00000623925 531 ntBASIC4.21□□□□□ -1.74
HLA-DMAP28067 AL356121.2-201ENST00000624715 780 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms