Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
XRCC1P18887 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 BTBD10P1-201ENST00000549824 1352 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.92□□□□□ -1.62
XRCC1P18887 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
XRCC1P18887 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
XRCC1P18887 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.92□□□□□ -1.62
XRCC1P18887 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.92□□□□□ -1.62
XRCC1P18887 PRPF38AP2-201ENST00000438179 851 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 AC004980.3-201ENST00000447046 365 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 RPL31P44-201ENST00000447680 377 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC4.92□□□□□ -1.62
XRCC1P18887 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
XRCC1P18887 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.92□□□□□ -1.62
XRCC1P18887 snoU13.20-201ENST00000459180 104 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 HMGN1P8-201ENST00000463578 288 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.92□□□□□ -1.62
XRCC1P18887 RN7SL441P-201ENST00000492388 296 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 AC073073.1-201ENST00000493920 463 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 AC010350.1-201ENST00000504908 231 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 AC147055.1-201ENST00000509261 750 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.92□□□□□ -1.62
XRCC1P18887 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 RPL23AP53-201ENST00000521854 457 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.92□□□□□ -1.62
XRCC1P18887 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.92□□□□□ -1.62
XRCC1P18887 AL049874.4-201ENST00000557593 255 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 MIR4436B2-201ENST00000581415 91 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 MIR4436B1-201ENST00000583272 91 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 AC119501.1-201ENST00000603646 475 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 MEMO1P5-201ENST00000604810 406 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 MIR8069-1-201ENST00000616627 86 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 MIR8069-2-201ENST00000621412 86 ntBASIC4.92□□□□□ -1.62
XRCC1P18887 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.92□□□□□ -1.62
XRCC1P18887 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.92□□□□□ -1.62
XRCC1P18887 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
XRCC1P18887 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
XRCC1P18887 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.92□□□□□ -1.62
XRCC1P18887 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.91□□□□□ -1.62
XRCC1P18887 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
XRCC1P18887 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
XRCC1P18887 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
XRCC1P18887 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
XRCC1P18887 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.91□□□□□ -1.62
XRCC1P18887 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
XRCC1P18887 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.91□□□□□ -1.62
XRCC1P18887 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
XRCC1P18887 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.91□□□□□ -1.62
XRCC1P18887 AC240504.1-201ENST00000395709 845 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.91□□□□□ -1.62
XRCC1P18887 CHEK2P3-201ENST00000416118 248 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.91□□□□□ -1.62
XRCC1P18887 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.91□□□□□ -1.62
XRCC1P18887 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.91□□□□□ -1.62
XRCC1P18887 BX323845.1-201ENST00000432417 179 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.91□□□□□ -1.62
XRCC1P18887 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.91□□□□□ -1.62
XRCC1P18887 SNRPFP2-201ENST00000440710 251 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
XRCC1P18887 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.91□□□□□ -1.62
XRCC1P18887 AL591623.2-201ENST00000449978 222 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 IGHV5-78-201ENST00000450948 295 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
XRCC1P18887 RPL7P16-201ENST00000479738 738 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 RN7SL346P-201ENST00000491561 294 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.91□□□□□ -1.62
XRCC1P18887 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.91□□□□□ -1.62
XRCC1P18887 RNA5SP249-201ENST00000516127 99 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 BRD9P1-201ENST00000529855 560 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC005868.1-201ENST00000536421 331 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.91□□□□□ -1.62
XRCC1P18887 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.91□□□□□ -1.62
XRCC1P18887 EIF1AXP2-201ENST00000555940 413 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 MIR3934-201ENST00000579806 107 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC233702.9-201ENST00000581528 203 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.91□□□□□ -1.62
XRCC1P18887 AP001521.2-201ENST00000608772 546 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC020763.5-201ENST00000623298 430 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC002044.3-201ENST00000623314 541 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.91□□□□□ -1.62
XRCC1P18887 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.91□□□□□ -1.62
XRCC1P18887 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
XRCC1P18887 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
XRCC1P18887 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.91□□□□□ -1.62
XRCC1P18887 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
XRCC1P18887 AL672167.1-205ENST00000641112 3080 ntBASIC4.91□□□□□ -1.62
XRCC1P18887 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
XRCC1P18887 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
XRCC1P18887 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.9□□□□□ -1.62
XRCC1P18887 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
XRCC1P18887 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
XRCC1P18887 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
XRCC1P18887 AL139128.1-201ENST00000413921 941 ntBASIC4.9□□□□□ -1.63
XRCC1P18887 RAB9AP4-201ENST00000415230 609 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms