Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC090958.1-201ENST00000511122 351 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC6.04□□□□□ -1.44
COL6A2P12110 AC010587.2-201ENST00000511727 448 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AC109445.1-201ENST00000512356 383 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 RNU6-678P-201ENST00000516832 109 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.04□□□□□ -1.44
COL6A2P12110 AC135983.3-201ENST00000528049 1226 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AP001317.1-201ENST00000531194 960 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC6.04□□□□□ -1.44
COL6A2P12110 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.04□□□□□ -1.44
COL6A2P12110 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.04□□□□□ -1.44
COL6A2P12110 AC037479.1-201ENST00000558361 625 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.04□□□□□ -1.44
COL6A2P12110 ARGFXP2-201ENST00000579304 949 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC6.04□□□□□ -1.44
COL6A2P12110 AC005479.3-201ENST00000602790 431 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 WISP1-OT1-201ENST00000602893 642 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AC239868.4-201ENST00000608318 671 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AC018755.4-201ENST00000619715 454 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AC009878.1-201ENST00000621819 340 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.04□□□□□ -1.44
COL6A2P12110 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 GTF2H2B-203ENST00000508065 1432 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
COL6A2P12110 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 MTND4P34-201ENST00000572715 1371 ntBASIC6.04□□□□□ -1.44
COL6A2P12110 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
COL6A2P12110 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.04□□□□□ -1.44
COL6A2P12110 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.04□□□□□ -1.44
COL6A2P12110 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.03□□□□□ -1.44
COL6A2P12110 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 AL133243.2-201ENST00000610331 1621 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 KYNUP3-201ENST00000574386 1341 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AC011477.1-204ENST00000623416 1325 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
COL6A2P12110 RNU105B-201ENST00000364478 208 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 SNORA26.8-201ENST00000391306 124 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 RNA5SP80-201ENST00000410475 111 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 AC022028.1-201ENST00000412054 408 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 NRBF2P2-201ENST00000413087 861 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AC245096.1-201ENST00000413104 546 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 AL022400.1-201ENST00000423946 935 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC6.03□□□□□ -1.44
COL6A2P12110 RPL23AP4-201ENST00000427757 463 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 FAM96AP1-201ENST00000430879 482 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AL590103.1-201ENST00000434488 307 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AL022324.2-201ENST00000434827 780 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 AC013403.1-201ENST00000436954 263 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 AC009263.1-201ENST00000441193 1239 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 OR52E7P-201ENST00000452394 933 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AL034369.1-201ENST00000453808 477 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 RN7SL836P-201ENST00000476140 296 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 AC068724.1-201ENST00000487100 792 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AC109927.2-201ENST00000506416 303 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 TOMM22P4-201ENST00000511318 336 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.03□□□□□ -1.44
COL6A2P12110 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
COL6A2P12110 AC109635.6-201ENST00000525487 1113 ntBASIC6.03□□□□□ -1.44
COL6A2P12110 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.03□□□□□ -1.44
COL6A2P12110 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.03□□□□□ -1.44
COL6A2P12110 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.03□□□□□ -1.44
COL6A2P12110 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms