Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.23□□□□□ -1.57
PCNAP12004 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCNAP12004 AL645568.2-201ENST00000432815 1337 ntBASIC5.23□□□□□ -1.57
PCNAP12004 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.23□□□□□ -1.57
PCNAP12004 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCNAP12004 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.22□□□□□ -1.57
PCNAP12004 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PCNAP12004 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCNAP12004 AC093535.2-201ENST00000624769 2326 ntBASIC5.22□□□□□ -1.57
PCNAP12004 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.22□□□□□ -1.57
PCNAP12004 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PCNAP12004 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.22□□□□□ -1.57
PCNAP12004 SNORA72.3-201ENST00000365074 132 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCNAP12004 ATF1P1-201ENST00000406040 927 ntBASIC5.22□□□□□ -1.57
PCNAP12004 SNORA11.5-201ENST00000408163 128 ntBASIC5.22□□□□□ -1.57
PCNAP12004 RN7SKP286-201ENST00000410894 299 ntBASIC5.22□□□□□ -1.57
PCNAP12004 RN7SKP97-201ENST00000410966 333 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.22□□□□□ -1.57
PCNAP12004 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.22□□□□□ -1.57
PCNAP12004 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.22□□□□□ -1.57
PCNAP12004 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.22□□□□□ -1.57
PCNAP12004 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.22□□□□□ -1.57
PCNAP12004 HMGB3P10-201ENST00000434734 572 ntBASIC5.22□□□□□ -1.57
PCNAP12004 GSTM5P1-201ENST00000434751 660 ntBASIC5.22□□□□□ -1.57
PCNAP12004 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCNAP12004 AL161636.2-201ENST00000445179 927 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.22□□□□□ -1.57
PCNAP12004 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.22□□□□□ -1.57
PCNAP12004 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.22□□□□□ -1.57
PCNAP12004 CALM1P2-201ENST00000452941 448 ntBASIC5.22□□□□□ -1.57
PCNAP12004 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PCNAP12004 SETP6-201ENST00000479329 568 ntBASIC5.22□□□□□ -1.57
PCNAP12004 ENPP7P11-201ENST00000505915 627 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC074087.1-201ENST00000512059 724 ntBASIC5.22□□□□□ -1.57
PCNAP12004 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.22□□□□□ -1.57
PCNAP12004 AC110760.3-202ENST00000515177 371 ntBASIC5.22□□□□□ -1.57
PCNAP12004 SCARNA20.4-201ENST00000516969 131 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.22□□□□□ -1.57
PCNAP12004 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.22□□□□□ -1.57
PCNAP12004 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.22□□□□□ -1.57
PCNAP12004 AP003066.2-201ENST00000529375 555 ntBASIC5.22□□□□□ -1.57
PCNAP12004 OR8X1P-201ENST00000534542 869 ntBASIC5.22□□□□□ -1.57
PCNAP12004 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.22□□□□□ -1.57
PCNAP12004 AC090888.3-201ENST00000558917 509 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.22□□□□□ -1.57
PCNAP12004 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.22□□□□□ -1.57
PCNAP12004 AC104229.1-201ENST00000561364 255 ntBASIC5.22□□□□□ -1.57
PCNAP12004 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.22□□□□□ -1.57
PCNAP12004 AC009237.13-201ENST00000603193 276 ntBASIC5.22□□□□□ -1.57
PCNAP12004 FO393422.1-201ENST00000603908 708 ntBASIC5.22□□□□□ -1.57
PCNAP12004 SUMO2P14-201ENST00000604488 293 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC025175.1-201ENST00000606482 759 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC034229.4-201ENST00000607861 441 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.22□□□□□ -1.57
PCNAP12004 AP003476.1-201ENST00000623984 516 ntBASIC5.22□□□□□ -1.57
PCNAP12004 AP003485.1-201ENST00000625093 753 ntBASIC5.22□□□□□ -1.57
PCNAP12004 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC5.22□□□□□ -1.57
PCNAP12004 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.22□□□□□ -1.57
PCNAP12004 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PCNAP12004 RBPJP2-201ENST00000618187 1444 ntBASIC5.22□□□□□ -1.57
PCNAP12004 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PCNAP12004 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.57
PCNAP12004 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PCNAP12004 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.21□□□□□ -1.57
PCNAP12004 AC011755.1-201ENST00000623763 2049 ntBASIC5.21□□□□□ -1.57
PCNAP12004 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PCNAP12004 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.21□□□□□ -1.57
PCNAP12004 ADAM5-202ENST00000399789 1942 ntBASIC5.21□□□□□ -1.57
PCNAP12004 AC073136.1-201ENST00000449426 2884 ntBASIC5.21□□□□□ -1.58
PCNAP12004 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.21□□□□□ -1.58
PCNAP12004 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 RNA5SP319-201ENST00000362768 119 ntBASIC5.21□□□□□ -1.58
PCNAP12004 RNU6-244P-201ENST00000391028 104 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AL031985.1-201ENST00000392713 418 ntBASIC5.21□□□□□ -1.58
PCNAP12004 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PCNAP12004 MTATP6P31-201ENST00000406985 692 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.21□□□□□ -1.58
PCNAP12004 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.21□□□□□ -1.58
PCNAP12004 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.21□□□□□ -1.58
PCNAP12004 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.21□□□□□ -1.58
PCNAP12004 AL390119.1-201ENST00000440329 312 ntBASIC5.21□□□□□ -1.58
PCNAP12004 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.21□□□□□ -1.58
PCNAP12004 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.21□□□□□ -1.58
PCNAP12004 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.21□□□□□ -1.58
PCNAP12004 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
PCNAP12004 PSMC1P13-201ENST00000458195 985 ntBASIC5.21□□□□□ -1.58
PCNAP12004 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PCNAP12004 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.21□□□□□ -1.58
PCNAP12004 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.21□□□□□ -1.58
PCNAP12004 AC090568.1-201ENST00000509499 856 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC5.21□□□□□ -1.58
PCNAP12004 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.21□□□□□ -1.58
PCNAP12004 IGHV3-63-201ENST00000518422 341 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AC092709.1-201ENST00000521355 1045 ntBASIC5.21□□□□□ -1.58
PCNAP12004 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms