Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC8.04□□□□□ -1.12
TOP2AP11388 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC8.04□□□□□ -1.12
TOP2AP11388 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 AC007159.1-201ENST00000566529 4706 ntBASIC8.04□□□□□ -1.12
TOP2AP11388 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
TOP2AP11388 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
TOP2AP11388 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC8.04□□□□□ -1.12
TOP2AP11388 RN7SKP280-201ENST00000364196 304 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 AL139095.3-201ENST00000419672 1203 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 BTF3P10-201ENST00000433415 495 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC8.03□□□□□ -1.12
TOP2AP11388 NUTF2P3-201ENST00000448540 384 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.03□□□□□ -1.12
TOP2AP11388 RPL21P129-201ENST00000491732 478 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 AL049874.2-201ENST00000492636 288 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 TRIM36-IT1-201ENST00000503723 881 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.03□□□□□ -1.12
TOP2AP11388 CASC19-203ENST00000523510 575 ntTSL 3 BASIC8.03□□□□□ -1.12
TOP2AP11388 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC8.03□□□□□ -1.12
TOP2AP11388 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC8.03□□□□□ -1.12
TOP2AP11388 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.03□□□□□ -1.12
TOP2AP11388 CYCSP40-201ENST00000575927 294 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC8.03□□□□□ -1.12
TOP2AP11388 AP000648.2-201ENST00000624182 404 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
TOP2AP11388 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC8.03□□□□□ -1.12
TOP2AP11388 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
TOP2AP11388 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC8.03□□□□□ -1.12
TOP2AP11388 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 AL583835.1-201ENST00000399570 407 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC8.03□□□□□ -1.12
TOP2AP11388 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC8.03□□□□□ -1.12
TOP2AP11388 AC011998.1-201ENST00000433403 117 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 PHBP16-201ENST00000446318 950 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 ISCUP1-201ENST00000454451 448 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 AC020593.1-201ENST00000507399 299 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC8.03□□□□□ -1.12
TOP2AP11388 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.03□□□□□ -1.12
TOP2AP11388 PSMB7P1-201ENST00000556349 514 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 RN7SL176P-201ENST00000580352 264 ntBASIC8.03□□□□□ -1.12
TOP2AP11388 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
TOP2AP11388 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
TOP2AP11388 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
TOP2AP11388 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
TOP2AP11388 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TOP2AP11388 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TOP2AP11388 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TOP2AP11388 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TOP2AP11388 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
TOP2AP11388 AL450345.1-202ENST00000605741 3881 ntBASIC8.02□□□□□ -1.13
TOP2AP11388 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TOP2AP11388 RPS26P8-201ENST00000393490 348 ntBASIC8.02□□□□□ -1.13
TOP2AP11388 AC013429.2-201ENST00000418798 781 ntBASIC8.02□□□□□ -1.13
TOP2AP11388 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
TOP2AP11388 RPL23AP43-201ENST00000446445 471 ntBASIC8.02□□□□□ -1.13
TOP2AP11388 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC8.02□□□□□ -1.13
TOP2AP11388 AC090515.3-201ENST00000560431 315 ntBASIC8.02□□□□□ -1.13
TOP2AP11388 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC8.02□□□□□ -1.13
TOP2AP11388 AC113403.1-201ENST00000604910 193 ntBASIC8.02□□□□□ -1.13
TOP2AP11388 FTO-203ENST00000460382 1517 ntTSL 5 BASIC8.02□□□□□ -1.13
TOP2AP11388 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC8.02□□□□□ -1.13
TOP2AP11388 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
TOP2AP11388 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TOP2AP11388 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC8.01□□□□□ -1.13
TOP2AP11388 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOP2AP11388 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TOP2AP11388 AC108467.2-201ENST00000617640 1597 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
TOP2AP11388 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
TOP2AP11388 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC8.01□□□□□ -1.13
TOP2AP11388 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.01□□□□□ -1.13
TOP2AP11388 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOP2AP11388 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
TOP2AP11388 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC8.01□□□□□ -1.13
TOP2AP11388 AL050305.1-201ENST00000399993 1230 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC8.01□□□□□ -1.13
TOP2AP11388 PCNPP4-201ENST00000414817 517 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC8.01□□□□□ -1.13
TOP2AP11388 HSFY6P-201ENST00000445573 403 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 BTF3P6-201ENST00000448054 499 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC8.01□□□□□ -1.13
TOP2AP11388 OR8A2P-201ENST00000528631 952 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 RPL7P50-201ENST00000600588 727 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 AC006065.6-201ENST00000625201 545 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 MIR3653-201ENST00000625572 110 ntBASIC8.01□□□□□ -1.13
TOP2AP11388 OR2L1P-202ENST00000641567 1023 ntBASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms