Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC044860.2-201ENST00000561005 179 ntBASIC4.86□□□□□ -1.63
SSX4O60224 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 AC122134.1-202ENST00000569111 1201 ntBASIC4.86□□□□□ -1.63
SSX4O60224 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 AC026741.1-201ENST00000605892 482 ntBASIC4.86□□□□□ -1.63
SSX4O60224 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 AC073869.10-201ENST00000642016 354 ntBASIC4.86□□□□□ -1.63
SSX4O60224 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 AC117409.1-201ENST00000470499 1310 ntBASIC4.86□□□□□ -1.63
SSX4O60224 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.86□□□□□ -1.63
SSX4O60224 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 NEAT1-202ENST00000501122 22743 ntBASIC4.86□□□□□ -1.63
SSX4O60224 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SSX4O60224 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
SSX4O60224 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.86□□□□□ -1.63
SSX4O60224 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SSX4O60224 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
SSX4O60224 AL022322.2-201ENST00000624072 20397 ntBASIC4.85□□□□□ -1.63
SSX4O60224 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 AL159987.1-201ENST00000347911 293 ntBASIC4.85□□□□□ -1.63
SSX4O60224 RNA5SP319-201ENST00000362768 119 ntBASIC4.85□□□□□ -1.63
SSX4O60224 RNU6-666P-201ENST00000363499 107 ntBASIC4.85□□□□□ -1.63
SSX4O60224 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSX4O60224 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSX4O60224 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SSX4O60224 PPIAP9-201ENST00000403866 498 ntBASIC4.85□□□□□ -1.63
SSX4O60224 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.85□□□□□ -1.63
SSX4O60224 SPTLC1P2-201ENST00000407089 121 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AL158825.1-201ENST00000414735 521 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 HSFY7P-201ENST00000432672 318 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 HSFY8P-201ENST00000437934 318 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC069540.1-201ENST00000446320 988 ntBASIC4.85□□□□□ -1.63
SSX4O60224 HMGN1P5-201ENST00000448591 263 ntBASIC4.85□□□□□ -1.63
SSX4O60224 RPL7P55-201ENST00000450522 746 ntBASIC4.85□□□□□ -1.63
SSX4O60224 HSFY5P-201ENST00000453726 309 ntBASIC4.85□□□□□ -1.63
SSX4O60224 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SSX4O60224 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX4O60224 LDHBP2-201ENST00000456969 1005 ntBASIC4.85□□□□□ -1.63
SSX4O60224 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 RPL35AP19-201ENST00000469425 329 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC100832.1-201ENST00000471945 383 ntBASIC4.85□□□□□ -1.63
SSX4O60224 RN7SL30P-201ENST00000488416 306 ntBASIC4.85□□□□□ -1.63
SSX4O60224 IGBP1P4-201ENST00000503202 879 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX4O60224 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 AC112518.2-201ENST00000508565 425 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC133963.2-201ENST00000513686 578 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC112198.4-201ENST00000515450 351 ntBASIC4.85□□□□□ -1.63
SSX4O60224 SNORA31.13-201ENST00000516624 135 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC139365.2-201ENST00000517972 253 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX4O60224 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 AC100784.1-201ENST00000522790 310 ntBASIC4.85□□□□□ -1.63
SSX4O60224 OR10G5P-201ENST00000532733 358 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX4O60224 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX4O60224 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 AC015720.2-201ENST00000567709 334 ntBASIC4.85□□□□□ -1.63
SSX4O60224 MIR4675-201ENST00000577898 77 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX4O60224 FKBP1AP1-201ENST00000594588 318 ntBASIC4.85□□□□□ -1.63
SSX4O60224 NANOGP3-201ENST00000605855 286 ntBASIC4.85□□□□□ -1.63
SSX4O60224 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.85□□□□□ -1.63
SSX4O60224 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.85□□□□□ -1.63
SSX4O60224 MIR6730-201ENST00000622213 67 ntBASIC4.85□□□□□ -1.63
SSX4O60224 MIR8080-201ENST00000622224 89 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC006840.1-201ENST00000623069 542 ntBASIC4.85□□□□□ -1.63
SSX4O60224 AC068880.4-201ENST00000623082 495 ntBASIC4.85□□□□□ -1.63
SSX4O60224 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.85□□□□□ -1.63
SSX4O60224 AC083899.2-201ENST00000423285 1376 ntBASIC4.85□□□□□ -1.63
SSX4O60224 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.85□□□□□ -1.63
SSX4O60224 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms