Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 OR9G4-201ENST00000302957 984 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMAD6O43541 MIR1182-201ENST00000408363 97 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.3□□□□□ -1.56
SMAD6O43541 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.3□□□□□ -1.56
SMAD6O43541 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 MTCO2P20-201ENST00000437339 673 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 AL589765.3-201ENST00000446084 462 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.3□□□□□ -1.56
SMAD6O43541 MTND2P6-201ENST00000455337 1030 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AL356390.1-201ENST00000455684 397 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 MTCYBP14-201ENST00000457471 715 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 DEFB109A-201ENST00000482450 265 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMAD6O43541 AC008410.1-201ENST00000483777 339 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC004453.1-201ENST00000487895 408 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 RPSAP51-201ENST00000497462 645 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 ATG10-AS1-201ENST00000504846 648 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.3□□□□□ -1.56
SMAD6O43541 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 RN7SKP265-201ENST00000516448 223 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.3□□□□□ -1.56
SMAD6O43541 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 MIR7853-201ENST00000584820 132 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.3□□□□□ -1.56
SMAD6O43541 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.3□□□□□ -1.56
SMAD6O43541 AC023762.1-201ENST00000603280 584 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC009597.2-201ENST00000604659 592 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 Z99289.3-201ENST00000605586 594 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AL451086.1-201ENST00000605596 223 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 AL157392.4-201ENST00000609756 345 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC100847.1-201ENST00000611316 481 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
SMAD6O43541 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMAD6O43541 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SMAD6O43541 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMAD6O43541 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SMAD6O43541 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMAD6O43541 AC114947.2-201ENST00000565748 2125 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.3□□□□□ -1.56
SMAD6O43541 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SMAD6O43541 RBPJP2-201ENST00000618187 1444 ntBASIC5.3□□□□□ -1.56
SMAD6O43541 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SMAD6O43541 TCP11X1-202ENST00000622971 1372 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
SMAD6O43541 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.29□□□□□ -1.56
SMAD6O43541 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.29□□□□□ -1.56
SMAD6O43541 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SMAD6O43541 AL645927.1-201ENST00000396783 406 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 NUDT19P3-201ENST00000404698 555 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AL358178.1-201ENST00000407698 397 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.29□□□□□ -1.56
SMAD6O43541 RN7SKP213-201ENST00000410746 298 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AL512504.1-201ENST00000415494 778 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.29□□□□□ -1.56
SMAD6O43541 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.29□□□□□ -1.56
SMAD6O43541 NPM1P22-201ENST00000427761 952 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.29□□□□□ -1.56
SMAD6O43541 AL512661.1-201ENST00000434586 1253 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 PSMD10P3-201ENST00000437000 448 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 GAPDHP58-201ENST00000438477 1006 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 RPS29P10-201ENST00000439197 166 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AL645931.1-201ENST00000439737 410 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC5.29□□□□□ -1.56
SMAD6O43541 MTND1P33-201ENST00000446251 917 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 Z83846.1-201ENST00000446798 265 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AC090804.1-201ENST00000448870 490 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.29□□□□□ -1.56
SMAD6O43541 NDUFA5P12-201ENST00000503796 343 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.29□□□□□ -1.56
SMAD6O43541 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.29□□□□□ -1.56
SMAD6O43541 AC105313.1-201ENST00000509121 353 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AC021193.1-201ENST00000511607 420 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 EIF3KP3-201ENST00000514461 639 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 RFPL4AP5-201ENST00000514977 504 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 RNU6-760P-201ENST00000516078 97 ntBASIC5.29□□□□□ -1.56
SMAD6O43541 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.29□□□□□ -1.56
SMAD6O43541 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.29□□□□□ -1.56
SMAD6O43541 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms