Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MAPK10-338ENST00000641647 3362 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 NEAT1-202ENST00000501122 22743 ntBASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.76□□□□□ -1.65
NPIPA3F8WFD2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC007342.7-201ENST00000624610 2337 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC092747.4-201ENST00000620519 1861 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 GPS2P1-201ENST00000411761 986 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 HSPE1P16-201ENST00000426640 348 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 RPL7AP49-201ENST00000429522 581 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 RBMY2QP-201ENST00000429799 1147 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AL591438.1-201ENST00000433508 581 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 RPL19P16-201ENST00000433839 588 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC007000.2-201ENST00000442564 487 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AL353718.1-201ENST00000451028 517 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 CYCSP53-201ENST00000455540 265 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AL133244.1-201ENST00000456007 258 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 MTND2P30-201ENST00000456663 382 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 PSMC1P13-201ENST00000458195 985 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 snoU13.20-201ENST00000459180 104 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 RPL35AP28-201ENST00000459730 331 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC002456.2-201ENST00000509356 380 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC012400.1-201ENST00000518452 381 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC134349.2-201ENST00000535136 910 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 MIR4700-201ENST00000578311 74 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 HSPA8P17-201ENST00000427029 1382 ntBASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.75□□□□□ -1.65
NPIPA3F8WFD2 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 SPATA2P1-201ENST00000431223 2055 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC068446.1-201ENST00000556425 1549 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 VPS35P1-201ENST00000563400 1518 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC103591.2-201ENST00000265259 766 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 OR9G4-201ENST00000302957 984 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AL353692.2-201ENST00000407054 335 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC124944.2-201ENST00000429866 1242 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 MTCYBP12-201ENST00000440559 1134 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AL513321.1-201ENST00000441175 761 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC092691.2-201ENST00000461787 803 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC108729.2-201ENST00000476543 840 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 RPS12P31-201ENST00000491419 398 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 IMPA1P1-201ENST00000510718 842 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC004980.4-201ENST00000513375 203 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 AC110775.1-201ENST00000513721 462 ntBASIC4.74□□□□□ -1.65
NPIPA3F8WFD2 RFPL4AP5-201ENST00000514977 504 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms