Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.33□□□□□ -1.4
CCDC66A2RUB6 AL158163.2-201ENST00000619110 700 ntBASIC6.33□□□□□ -1.4
CCDC66A2RUB6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 AC011755.1-201ENST00000623763 2049 ntBASIC6.33□□□□□ -1.4
CCDC66A2RUB6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 MTND5P23-201ENST00000430812 1655 ntBASIC6.33□□□□□ -1.4
CCDC66A2RUB6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC66A2RUB6 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 ELL2P3-201ENST00000457883 1602 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 DDX43P2-201ENST00000604753 1354 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AF287957.1-201ENST00000607368 1595 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 METTL21EP-201ENST00000298105 713 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 NACA3P-201ENST00000359690 648 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 RN7SKP149-201ENST00000363008 344 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 RNA5SP77-201ENST00000365394 120 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 SNORA70.6-201ENST00000383934 134 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 SNORA40.2-201ENST00000390847 128 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AL139805.1-201ENST00000407837 289 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 SNORA11.5-201ENST00000408163 128 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AP000357.1-201ENST00000409926 1165 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 RNA5SP156-201ENST00000410250 110 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 CTSL3P-202ENST00000412179 788 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 RPS7P8-201ENST00000418311 581 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 RPL24P2-201ENST00000421023 475 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 TNPO1P1-201ENST00000423641 1138 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AL645936.1-201ENST00000441979 518 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AC118469.1-201ENST00000442943 488 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AC012512.1-201ENST00000446594 718 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 RPL31P3-201ENST00000458430 332 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 NDUFB4P12-201ENST00000513465 390 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 PRELID3BP4-201ENST00000515476 571 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 RN7SKP288-201ENST00000516227 268 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AC068305.2-201ENST00000550567 1205 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 VN1R74P-201ENST00000613259 503 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 MIR6133-201ENST00000617057 108 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 ZNF663P-202ENST00000641770 1131 ntBASIC6.32□□□□□ -1.4
CCDC66A2RUB6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC66A2RUB6 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 AC130304.1-201ENST00000622942 2385 ntBASIC6.31□□□□□ -1.4
CCDC66A2RUB6 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 AC006042.3-201ENST00000454684 1469 ntBASIC6.31□□□□□ -1.4
CCDC66A2RUB6 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 RN7SKP250-201ENST00000363924 321 ntBASIC6.31□□□□□ -1.4
CCDC66A2RUB6 CRP-204ENST00000368112 787 ntTSL 2 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 AC087752.1-201ENST00000391360 558 ntBASIC6.31□□□□□ -1.4
CCDC66A2RUB6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 TEX41-202ENST00000414256 604 ntTSL 5 BASIC6.31□□□□□ -1.4
CCDC66A2RUB6 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms