Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL139407.1-201ENST00000613826 1175 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC068870.2-201ENST00000620635 389 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 OR52B5P-202ENST00000641118 1110 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 DDX18P6-201ENST00000450119 1997 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 AC004076.2-201ENST00000620532 3323 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SSX2IPQ9Y2D8 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF90P1-201ENST00000480493 1951 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC234772.1-201ENST00000377927 937 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 GSTA12P-201ENST00000402398 508 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF602P-201ENST00000405929 924 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 VPS26BP1-201ENST00000417155 755 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 VN1R42P-201ENST00000424651 344 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC115285.1-201ENST00000424879 736 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 HMGN2P27-201ENST00000427352 270 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AL009048.1-201ENST00000450437 298 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 METTL15P1-201ENST00000481421 1045 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 RPS7P6-201ENST00000485777 579 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC004453.1-201ENST00000487895 408 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 COX6B1P2-201ENST00000489624 230 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 IGLV3-24-201ENST00000517477 197 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 BUD31P1-201ENST00000521828 359 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 BLZF2P-201ENST00000553776 1130 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 MTND3P12-201ENST00000559068 328 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AP001160.4-201ENST00000596971 382 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AL606834.3-201ENST00000602615 496 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AL133481.2-203ENST00000607558 139 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AL592494.3-201ENST00000609485 464 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC004948.1-201ENST00000609858 672 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AC126915.2-201ENST00000610957 190 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 RMST_5.1-201ENST00000618704 126 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AP000676.4-201ENST00000624659 623 ntBASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SSX2IPQ9Y2D8 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 MTHFD2P5-201ENST00000320415 844 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 SNORA67-201ENST00000384423 137 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 RNU6-298P-201ENST00000390888 96 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 MTCO1P51-201ENST00000427672 1060 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 DSTNP5-201ENST00000427921 523 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AL035246.1-201ENST00000433554 1255 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 MTCYBP21-201ENST00000443300 1113 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AC099063.2-201ENST00000446360 662 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 FAR2P1-206ENST00000449736 709 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AURKAPS1-201ENST00000451805 1212 ntBASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.9□□□□□ -1.46
SSX2IPQ9Y2D8 CYCSP20-201ENST00000473154 315 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms