Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 SNORA26.10-201ENST00000516427 141 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC013701.1-201ENST00000522657 465 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 SETP1-201ENST00000556014 845 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC009268.1-201ENST00000561352 1203 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC233702.9-201ENST00000581528 203 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC018695.5-201ENST00000605872 315 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC108359.1-201ENST00000616451 1211 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AL445528.2-201ENST00000620582 470 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 AC074140.1-201ENST00000621617 208 ntBASIC4.78□□□□□ -1.64
RNF6Q9Y252 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
RNF6Q9Y252 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
RNF6Q9Y252 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 MTCO1P15-201ENST00000529569 1526 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF6Q9Y252 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF6Q9Y252 RNU1-146P-201ENST00000364015 165 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 RNU4-4P-201ENST00000364588 130 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 RNU6-729P-201ENST00000384399 107 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AL035696.2-201ENST00000407941 709 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 RNU6-564P-201ENST00000410983 104 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 GLUD1P9-201ENST00000420997 1173 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 NPM1P26-201ENST00000426339 738 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 RBMY2QP-201ENST00000429799 1147 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 HIGD1AP8-201ENST00000453927 274 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC009127.1-201ENST00000467090 155 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC090114.3-201ENST00000479267 829 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 OR9N1P-201ENST00000491296 333 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 RPS4XP20-201ENST00000505751 772 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC092593.2-201ENST00000513866 913 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC018442.3-201ENST00000523025 183 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC092490.3-201ENST00000545370 572 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC104785.1-201ENST00000603220 588 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC009597.2-201ENST00000604659 592 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 MIR6820-201ENST00000611508 62 ntBASIC4.77□□□□□ -1.65
RNF6Q9Y252 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF6Q9Y252 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF6Q9Y252 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF6Q9Y252 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF6Q9Y252 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
RNF6Q9Y252 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.77□□□□□ -1.65
RNF6Q9Y252 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC087565.3-202ENST00000642085 1603 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 RNU6-249P-201ENST00000363016 102 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF6Q9Y252 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 RPA2P2-201ENST00000419698 796 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.76□□□□□ -1.65
RNF6Q9Y252 FABP7P2-201ENST00000429946 379 ntBASIC4.76□□□□□ -1.65
RNF6Q9Y252 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RNF6Q9Y252 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms